General features
| Gene ID | MYPE4830
|
| Type | CDS
|
| From | 618467
|
| To | 621421
|
| Strand | +
|
| General name |
|
| Definition | structural maintenance of chromosomes SMC superfamily proteins
|
| nt length | 2955
|
| aa length | 984
|
| m.w. | 111424.87
|
| COG | [D] Cell cycle control, cell division, chromosome partitioning
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN426 SMC family, chromosome/DNA binding/protecting functions 514542:511594 | 737 | 0.0e+00
|
| mgen | WP_010869416.1 chromosome segregation protein SMC [Mycoplasma genitalium] | 737 | 0.0e+00
|
| mpul | WP_010925515.1 AAA family ATPase [Mycoplasma pulmonis] | 540 | 2.4e-178
|
| mmob | WP_011264930.1 AAA family ATPase [Mycoplasma mobile] | 597 | 0.0e+00
|
| mmyc | NP_975462.1 hypothetical protein MSC_0476 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 523 | 5.9e-172
|
| mgal | WP_011113402.1 AAA family ATPase [Mycoplasma gallisepticum] | 719 | 0.0e+00
|
| uure | WP_004026333.1 chromosome segregation protein SMC [Ureaplasma urealyticum] | 641 | 0.0e+00
|
| phyt | WP_041624994.1 hypothetical protein [Onion yellows phytoplasma] | 34 | 5.7e-03
|
| bsub | NP_389476.2 chromosome condensation and segregation SMC ATPase [Bacillus subtilis subsp. subtilis str. 168] | 311 | 5.4e-91
|
| cace | WP_010965058.1 MULTISPECIES: chromosome segregation protein SMC [Clostridium] | 221 | 4.0e-60
|
| ecoli | YP_026172.1 DNA repair protein RecN [Escherichia coli str. K-12 substr. MG1655] | 44 | 2.7e-05
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| SMC_N | 2 | RecF/RecN/SMC N terminal domain | 3-138, 652-965 | 199.0 | 6.4e-59
|
| SMC_hinge | 1 | SMC proteins Flexible Hinge Domain | 417-535 | 90.1 | 1.2e-25
|
| AAA_23 | 1 | AAA domain | 11-228 | 39.8 | 6.9e-10
|
BLAST search result (top 10 hits)
Maintained by Jun Ishikawa