General features

Gene IDMYPE4830
General name
Definitionstructural maintenance of chromosomes SMC superfamily proteins
nt length2955
aa length984
COG[D] Cell cycle control, cell division, chromosome partitioning

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN426 SMC family, chromosome/DNA binding/protecting functions 514542:5115947370.0e+00
mgenWP_010869416.1 chromosome segregation protein SMC [Mycoplasma genitalium]7370.0e+00
mpulWP_010925515.1 AAA family ATPase [Mycoplasma pulmonis]5402.4e-178
mmobWP_011264930.1 AAA family ATPase [Mycoplasma mobile]5970.0e+00
mmycNP_975462.1 hypothetical protein MSC_0476 [Mycoplasma mycoides subsp. mycoides SC str. PG1]5235.9e-172
mgalWP_011113402.1 AAA family ATPase [Mycoplasma gallisepticum]7190.0e+00
uureWP_004026333.1 chromosome segregation protein SMC [Ureaplasma urealyticum]6410.0e+00
phytWP_041624994.1 hypothetical protein [Onion yellows phytoplasma]345.7e-03
bsubNP_389476.2 chromosome condensation and segregation SMC ATPase [Bacillus subtilis subsp. subtilis str. 168]3115.4e-91
caceWP_010965058.1 MULTISPECIES: chromosome segregation protein SMC [Clostridium]2214.0e-60
ecoliYP_026172.1 DNA repair protein RecN [Escherichia coli str. K-12 substr. MG1655]442.7e-05

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:

ModelNo.Descrip tionPosition (aa)ScoreE-value

SMC_N2RecF/RecN/SMC N terminal domain3-138, 652-965199.06.4e-59

SMC_hinge1SMC proteins Flexible Hinge Domain417-53590.11.2e-25

AAA_231AAA domain11-22839.86.9e-10

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077307.1| AAA family ATPase [Mycoplasma penetrans]984/984 (100%)51430.0e+00
ref|WP_129374407.1| AAA family ATPase [Mycoplasma penetrans]983/984 (99%)51380.0e+00
ref|WP_004025430.1| AAA family ATPase [Mycoplasma iowae]614/982 (62%)31950.0e+00
ref|WP_027120119.1| AAA family ATPase [Mycoplasma testudinis]428/981 (43%)21050.0e+00
ref|WP_027123920.1| AAA family ATPase [Mycoplasma pirum]431/982 (43%)20930.0e+00
ref|WP_033160121.1| AAA family ATPase [Mycoplasma alvi]414/981 (42%)20430.0e+00
ref|WP_161609387.1| AAA family ATPase [Mycoplasma pneumoniae]406/984 (41%)19050.0e+00
ref|WP_159201932.1| AAA family ATPase [Mycoplasma pneumoniae]405/984 (41%)19030.0e+00
ref|WP_014574976.1| AAA family ATPase [Mycoplasma pneumoniae]405/984 (41%)19030.0e+00
ref|WP_010869416.1| chromosome segregation protein SMC [Mycoplasma genitalium]419/982 (42%)19020.0e+00

Maintained by Jun Ishikawa