General features

Gene IDMPN426
General name
DefinitionSMC family, chromosome/DNA binding/protecting functions
nt length2949
aa length982
COG[D] Cell cycle control, cell division, chromosome partitioning

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE4830 structural maintenance of chromosomes SMC superfamily proteins 618467:6214217510.0e+00
mgenWP_010869416.1 chromosome segregation protein SMC [Mycoplasma genitalium]14410.0e+00
mpulWP_010925515.1 AAA family ATPase [Mycoplasma pulmonis]4641.0e-149
mmobWP_011264930.1 AAA family ATPase [Mycoplasma mobile]5119.6e-168
mmycNP_975462.1 hypothetical protein MSC_0476 [Mycoplasma mycoides subsp. mycoides SC str. PG1]4613.0e-148
mgalWP_011113402.1 AAA family ATPase [Mycoplasma gallisepticum]8600.0e+00
uureWP_004026333.1 chromosome segregation protein SMC [Ureaplasma urealyticum]5670.0e+00
bsubNP_389476.2 chromosome condensation and segregation SMC ATPase [Bacillus subtilis subsp. subtilis str. 168]2143.4e-58
caceWP_010965058.1 MULTISPECIES: chromosome segregation protein SMC [Clostridium]1985.2e-53
ecoliYP_026172.1 DNA repair protein RecN [Escherichia coli str. K-12 substr. MG1655]534.9e-08

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:

ModelNo.Descrip tionPosition (aa)ScoreE-value

SMC_N1RecF/RecN/SMC N terminal domain3-962232.05.3e-69

SMC_hinge1SMC proteins Flexible Hinge Domain416-53572.04.7e-20

AAA_211AAA domain, putative AbiEii toxin, Type IV TA system829-94060.13e-16

AAA_231AAA domain11-30347.92.2e-12

AAA_151AAA ATPase domain5-38045.67.5e-12

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874782.1| AAA family ATPase [Mycoplasma pneumoniae] 982/982 (100%)51740.0e+00
ref|WP_161609387.1| AAA family ATPase [Mycoplasma pneumoniae]981/982 (99%)51670.0e+00
ref|WP_014574976.1| AAA family ATPase [Mycoplasma pneumoniae]980/982 (99%)51600.0e+00
ref|WP_014325525.1| AAA family ATPase [Mycoplasma pneumoniae]979/982 (99%)51500.0e+00
ref|WP_159201932.1| AAA family ATPase [Mycoplasma pneumoniae]979/982 (99%)51490.0e+00
ref|WP_159243739.1| AAA family ATPase, partial [Mycoplasma pneumoniae]885/885 (100%)46580.0e+00
ref|WP_010869416.1| chromosome segregation protein SMC [Mycoplasma genitalium]717/982 (73%)37290.0e+00
ref|WP_014894271.1| chromosome segregation protein SMC [Mycoplasma genitalium]717/982 (73%)37260.0e+00
ref|WP_159203650.1| AAA family ATPase, partial [Mycoplasma pneumoniae]684/688 (99%)35820.0e+00
ref|WP_027120119.1| AAA family ATPase [Mycoplasma testudinis]508/978 (51%)25410.0e+00

Maintained by Jun Ishikawa