General features

Gene IDMYPE230
TypeCDS
From34086
To34802
Strand+
General namespoU
DefinitionrRNA methylase
nt length717
aa length238
m.w.27243.40
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN355 yacO tRNA/rRNA methyltransferase-like protein 424238:4235101471.9e-45
mgenWP_010869393.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma genitalium]1485.3e-46
mpulWP_010924982.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma pulmonis]1262.3e-37
mmobWP_011264667.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma mobile]922.4e-24
mmycNP_975927.1 rRNA methylase [Mycoplasma mycoides subsp. mycoides SC str. PG1]1263.9e-37
mgalWP_011113939.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gallisepticum]1393.4e-42
uureWP_004025602.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Ureaplasma]1551.6e-48
phytWP_101674489.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Onion yellows phytoplasma]1031.3e-28
bsubNP_387977.1 23S rRNA (Gm2251)-methyltransferase [Bacillus subtilis subsp. subtilis str. 168]1073.4e-29
caceWP_010966431.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Clostridium]1291.1e-37
ecoliNP_418601.1 23S rRNA 2'-O-ribose G2251 methyltransferase [Escherichia coli str. K-12 substr. MG1655]1094.8e-30

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

SpoU_methylase1SpoU rRNA Methylase family90-232128.42.2e-37

SpoU_sub_bind1RNA 2'-O ribose methyltransferase substrate binding5-6625.71e-05

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011076849.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma pen...238/238 (100%)12031.7e-166
ref|WP_051790188.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma iow...121/234 (51%)5271.5e-63
ref|WP_004024721.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma iow...121/234 (51%)5261.8e-63
ref|WP_081794282.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma pir...98/232 (42%)3932.5e-43
ref|WP_004025602.1| MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [...106/231 (45%)3913.8e-43
ref|WP_006689126.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Ureaplasma par...106/231 (45%)3905.4e-43
ref|WP_038102136.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Ureaplasma div...95/231 (41%)3853.3e-42
ref|WP_004026334.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Ureaplasma ure...103/231 (44%)3829.3e-42
ref|WP_006688840.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Ureaplasma par...105/231 (45%)3821.0e-41
ref|WP_016829245.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Ureaplasma ure...102/231 (44%)3811.4e-41


Maintained by Jun Ishikawa