General features

Gene IDMPN355
TypeCDS
From424238
To423510
Strand-
General nameyacO
DefinitiontRNA/rRNA methyltransferase-like protein
nt length729
aa length242
m.w.27775.24
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE230 spoU rRNA methylase 34086:348021473.2e-45
mgenWP_010869393.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma genitalium]3287.1e-117
mpulWP_010924982.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma pulmonis]1011.2e-27
mmobWP_011264667.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma mobile]959.4e-26
mmycNP_975927.1 rRNA methylase [Mycoplasma mycoides subsp. mycoides SC str. PG1]1212.8e-35
mgalWP_011113939.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gallisepticum]2167.2e-72
uureWP_004025602.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Ureaplasma]1876.0e-61
phytWP_101674489.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Onion yellows phytoplasma]1141.0e-32
bsubNP_387977.1 23S rRNA (Gm2251)-methyltransferase [Bacillus subtilis subsp. subtilis str. 168]1094.1e-30
caceWP_010966431.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Clostridium]1145.2e-32
ecoliNP_418601.1 23S rRNA 2'-O-ribose G2251 methyltransferase [Escherichia coli str. K-12 substr. MG1655]959.9e-25

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

SpoU_methylase1SpoU rRNA Methylase family97-238132.01.7e-38

SpoU_sub_bind1RNA 2'-O ribose methyltransferase substrate binding10-7744.91e-11

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874711.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma pne...242/242 (100%)12901.6e-179
ref|WP_058157834.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma pne...241/242 (99%)12859.9e-179
ref|WP_014325480.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma pne...240/242 (99%)12729.0e-177
ref|WP_010869393.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gen...151/242 (62%)8422.4e-111
ref|WP_014574793.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gal...119/240 (49%)5585.9e-68
ref|WP_065164900.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gal...119/240 (49%)5579.3e-68
ref|WP_151059848.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gal...119/240 (49%)5579.4e-68
ref|WP_014886266.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gal...117/232 (50%)5542.7e-67
ref|WP_084266103.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma tes...111/240 (46%)5532.7e-67
ref|WP_011883490.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gal...118/240 (49%)5515.9e-67


Maintained by Jun Ishikawa