General features
| Gene ID | MPN576
|
| Type | CDS
|
| From | 699905
|
| To | 698685
|
| Strand | -
|
| General name | glyA
|
| Definition | serine hydroxymethyltransferase
|
| nt length | 1221
|
| aa length | 406
|
| m.w. | 45265.77
|
| COG | [E] Amino acid transport and metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE2730 serine hydroxymethyl transferase 361202:359871 | 506 | 1.0e-180
|
| mgen | WP_009885629.1 serine hydroxymethyltransferase [Mycoplasma genitalium] | 683 | 0.0e+00
|
| mpul | WP_010925143.1 serine hydroxymethyltransferase [Mycoplasma pulmonis] | 417 | 2.2e-146
|
| mmob | WP_011264991.1 serine hydroxymethyltransferase [Mycoplasma mobile] | 440 | 2.0e-155
|
| mmyc | NP_975863.1 serine hydroxymethyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 427 | 3.8e-150
|
| mgal | WP_011113533.1 serine hydroxymethyltransferase [Mycoplasma gallisepticum] | 486 | 9.1e-174
|
| uure | WP_004025654.1 urease subunit alpha [Ureaplasma urealyticum] | 25 | 2.3e+00
|
| phyt | WP_011160556.1 serine hydroxymethyltransferase [Onion yellows phytoplasma] | 462 | 2.4e-164
|
| bsub | NP_391571.1 serine hydroxymethyltransferase [Bacillus subtilis subsp. subtilis str. 168] | 414 | 1.5e-144
|
| cace | WP_010965562.1 MULTISPECIES: serine hydroxymethyltransferase [Clostridium] | 417 | 6.8e-146
|
| ecoli | NP_417046.1 serine hydroxymethyltransferase [Escherichia coli str. K-12 substr. MG1655] | 397 | 8.6e-138
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| SHMT | 1 | Serine hydroxymethyltransferase | 2-371 | 499.9 | 4e-150
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874933.1| serine hydroxymethyltransferase [Mycoplasma pneumoniae] | 406/406 (100%) | 2183 | 0.0e+00
|
| ref|WP_014325608.1| serine hydroxymethyltransferase [Mycoplasma pneumoniae] | 405/406 (99%) | 2179 | 0.0e+00
|
| ref|WP_009885629.1| serine hydroxymethyltransferase [Mycoplasma genitalium] | 316/406 (77%) | 1763 | 0.0e+00
|
| ref|WP_014894687.1| serine hydroxymethyltransferase [Mycoplasma genitalium] | 316/406 (77%) | 1762 | 0.0e+00
|
| ref|WP_014894316.1| serine hydroxymethyltransferase [Mycoplasma genitalium] | 316/406 (77%) | 1760 | 0.0e+00
|
| ref|WP_014894496.1| serine hydroxymethyltransferase [Mycoplasma genitalium] | 315/406 (77%) | 1756 | 0.0e+00
|
| ref|WP_156933109.1| serine hydroxymethyltransferase [Mycoplasma testudinis] | 248/403 (61%) | 1329 | 6.0e-180
|
| ref|WP_027124222.1| serine hydroxymethyltransferase [Mycoplasma pirum] | 243/403 (60%) | 1319 | 1.8e-178
|
| ref|WP_044891230.1| serine hydroxymethyltransferase [Mycoplasma penetrans] | 235/402 (58%) | 1304 | 3.6e-176
|
| ref|WP_033160247.1| serine hydroxymethyltransferase [Mycoplasma alvi] | 235/402 (58%) | 1267 | 1.3e-170
|
Maintained by Jun Ishikawa