General features
| Gene ID | MYPE2730
|
| Type | CDS
|
| From | 361202
|
| To | 359871
|
| Strand | -
|
| General name |
|
| Definition | serine hydroxymethyl transferase
|
| nt length | 1332
|
| aa length | 443
|
| m.w. | 49537.56
|
| COG | [E] Amino acid transport and metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN576 glyA serine hydroxymethyltransferase 699905:698685 | 506 | 0.0e+00
|
| mgen | WP_009885629.1 serine hydroxymethyltransferase [Mycoplasma genitalium] | 477 | 1.2e-169
|
| mpul | WP_010925143.1 serine hydroxymethyltransferase [Mycoplasma pulmonis] | 422 | 1.3e-147
|
| mmob | WP_011264991.1 serine hydroxymethyltransferase [Mycoplasma mobile] | 433 | 5.2e-152
|
| mmyc | NP_975863.1 serine hydroxymethyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 474 | 6.4e-168
|
| mgal | WP_011113533.1 serine hydroxymethyltransferase [Mycoplasma gallisepticum] | 550 | 0.0e+00
|
| phyt | WP_011160556.1 serine hydroxymethyltransferase [Onion yellows phytoplasma] | 409 | 1.2e-142
|
| bsub | NP_391571.1 serine hydroxymethyltransferase [Bacillus subtilis subsp. subtilis str. 168] | 447 | 7.6e-157
|
| cace | WP_010965562.1 MULTISPECIES: serine hydroxymethyltransferase [Clostridium] | 436 | 9.8e-153
|
| ecoli | NP_417046.1 serine hydroxymethyltransferase [Escherichia coli str. K-12 substr. MG1655] | 410 | 2.8e-142
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| SHMT | 1 | Serine hydroxymethyltransferase | 37-408 | 526.6 | 3e-158
|
| DegT_DnrJ_EryC1 | 1 | DegT/DnrJ/EryC1/StrS aminotransferase family | 168-282 | 24.0 | 2.2e-05
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_044891230.1| serine hydroxymethyltransferase [Mycoplasma penetrans] | 412/412 (100%) | 2180 | 0.0e+00
|
| ref|WP_027124222.1| serine hydroxymethyltransferase [Mycoplasma pirum] | 263/407 (64%) | 1456 | 0.0e+00
|
| ref|WP_156933109.1| serine hydroxymethyltransferase [Mycoplasma testudinis] | 258/418 (61%) | 1432 | 0.0e+00
|
| ref|WP_011113533.1| serine hydroxymethyltransferase [Mycoplasma gallisepticum] | 268/405 (66%) | 1416 | 0.0e+00
|
| ref|WP_011884162.1| serine hydroxymethyltransferase [Mycoplasma gallisepticum] | 267/405 (65%) | 1414 | 0.0e+00
|
| ref|WP_065165806.1| serine hydroxymethyltransferase [Mycoplasma gallisepticum] | 267/405 (65%) | 1410 | 0.0e+00
|
| ref|WP_027121987.1| serine hydroxymethyltransferase [Mycoplasma imitans] | 265/405 (65%) | 1408 | 0.0e+00
|
| ref|WP_033160247.1| serine hydroxymethyltransferase [Mycoplasma alvi] | 252/412 (61%) | 1391 | 0.0e+00
|
| ref|WP_014325608.1| serine hydroxymethyltransferase [Mycoplasma pneumoniae] | 236/407 (57%) | 1307 | 3.1e-176
|
| ref|WP_010874933.1| serine hydroxymethyltransferase [Mycoplasma pneumoniae] | 235/407 (57%) | 1303 | 1.7e-175
|
Maintained by Jun Ishikawa