General features
| Gene ID | MYPE2530
|
| Type | CDS
|
| From | 316009
|
| To | 317346
|
| Strand | +
|
| General name | ffh
|
| Definition | signal recognition particle GTPase Ffh
|
| nt length | 1338
|
| aa length | 445
|
| m.w. | 49871.03
|
| COG | [N] Cell motility
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN061 ffh signal recognition particle protein 78977:77625 | 489 | 1.5e-173
|
| mgen | WP_081440606.1 signal recognition particle protein [Mycoplasma genitalium] | 449 | 3.8e-158
|
| mpul | WP_010925146.1 signal recognition particle protein [Mycoplasma pulmonis] | 399 | 4.7e-138
|
| mmob | WP_011265047.1 signal recognition particle protein [Mycoplasma mobile] | 392 | 1.1e-135
|
| mmyc | NP_975409.1 signal recognition particle M54 protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 395 | 2.0e-136
|
| mgal | WP_011113531.1 signal recognition particle protein [Mycoplasma gallisepticum] | 523 | 0.0e+00
|
| uure | WP_012560341.1 signal recognition particle protein [Ureaplasma urealyticum] | 569 | 0.0e+00
|
| phyt | WP_041624871.1 signal recognition particle protein [Onion yellows phytoplasma] | 288 | 7.1e-95
|
| bsub | NP_389480.1 signal recognition particle-like (SRP) GTPase [Bacillus subtilis subsp. subtilis str. 168] | 324 | 4.2e-108
|
| cace | WP_010965061.1 MULTISPECIES: signal recognition particle protein [Clostridium] | 324 | 5.0e-108
|
| ecoli | NP_417101.1 signal recognition particle protein component [Escherichia coli str. K-12 substr. MG1655] | 298 | 5.2e-98
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| SRP54 | 1 | SRP54-type protein, GTPase domain | 102-295 | 242.7 | 2.3e-72
|
| SRP_SPB | 1 | Signal peptide binding domain | 327-426 | 79.3 | 2.5e-22
|
| SRP54_N | 1 | SRP54-type protein, helical bundle domain | 16-83 | 46.8 | 2.5e-12
|
| AAA_17 | 1 | AAA domain | 106-220 | 29.2 | 1e-06
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077079.1| signal recognition particle protein [Mycoplasma penetrans] | 445/445 (100%) | 2296 | 0.0e+00
|
| ref|WP_004024915.1| signal recognition particle protein [Mycoplasma iowae] | 352/445 (79%) | 1862 | 0.0e+00
|
| ref|WP_027123880.1| signal recognition particle protein [Mycoplasma pirum] | 276/445 (62%) | 1497 | 0.0e+00
|
| ref|WP_033159801.1| signal recognition particle protein [Mycoplasma alvi] | 275/445 (61%) | 1477 | 0.0e+00
|
| ref|WP_141917972.1| signal recognition particle protein [Ureaplasma urealyticum] | 271/441 (61%) | 1469 | 0.0e+00
|
| ref|WP_004026706.1| signal recognition particle protein [Ureaplasma urealyticum] | 271/441 (61%) | 1467 | 0.0e+00
|
| ref|WP_012560341.1| signal recognition particle protein [Ureaplasma urealyticum] | 271/441 (61%) | 1467 | 0.0e+00
|
| ref|WP_006688813.1| signal recognition particle protein [Ureaplasma parvum] | 272/441 (61%) | 1467 | 0.0e+00
|
| ref|WP_004027181.1| signal recognition particle protein [Ureaplasma urealyticum] | 271/441 (61%) | 1466 | 0.0e+00
|
| ref|WP_004026164.1| signal recognition particle protein [Ureaplasma urealyticum] | 271/441 (61%) | 1466 | 0.0e+00
|
Maintained by Jun Ishikawa