General features

Gene IDMPN061
TypeCDS
From78977
To77625
Strand-
General nameffh
Definitionsignal recognition particle protein
nt length1353
aa length450
m.w.50140.43
COG[U] Intracellular trafficking, secretion, and vesicular transport


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE2530 ffh signal recognition particle GTPase Ffh 316009:3173464892.4e-173
mgenWP_081440606.1 signal recognition particle protein [Mycoplasma genitalium]7150.0e+00
mpulWP_010925146.1 signal recognition particle protein [Mycoplasma pulmonis]3815.0e-131
mmobWP_011265047.1 signal recognition particle protein [Mycoplasma mobile]3721.7e-127
mmycNP_975409.1 signal recognition particle M54 protein [Mycoplasma mycoides subsp. mycoides SC str. PG1]3671.7e-125
mgalWP_011113531.1 signal recognition particle protein [Mycoplasma gallisepticum]5240.0e+00
uureWP_012560341.1 signal recognition particle protein [Ureaplasma urealyticum]5080.0e+00
phytWP_041624871.1 signal recognition particle protein [Onion yellows phytoplasma]2908.8e-96
bsubNP_389480.1 signal recognition particle-like (SRP) GTPase [Bacillus subtilis subsp. subtilis str. 168]3251.8e-108
caceWP_010965061.1 MULTISPECIES: signal recognition particle protein [Clostridium]3121.9e-103
ecoliNP_417101.1 signal recognition particle protein component [Escherichia coli str. K-12 substr. MG1655]3021.8e-99

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

SRP541SRP54-type protein, GTPase domain101-294235.05.4e-70

SRP_SPB1Signal peptide binding domain326-42283.01.8e-23

SRP54_N1SRP54-type protein, helical bundle domain15-7551.87.2e-14

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874418.1| signal recognition particle protein [Mycoplasma pneumoniae] 450/450 (100%)23600.0e+00
ref|WP_014325315.1| signal recognition particle protein [Mycoplasma pneumoniae]449/450 (99%)23560.0e+00
ref|WP_058158329.1| signal recognition particle protein [Mycoplasma pneumoniae]449/450 (99%)23550.0e+00
ref|WP_054175897.1| signal recognition particle protein [Mycoplasma pneumoniae]448/450 (99%)23420.0e+00
ref|WP_041360871.1| signal recognition particle protein [Mycoplasma genitalium]352/443 (79%)19080.0e+00
ref|WP_081440606.1| signal recognition particle protein [Mycoplasma genitalium]341/430 (79%)18450.0e+00
ref|WP_027123880.1| signal recognition particle protein [Mycoplasma pirum]270/442 (61%)14070.0e+00
ref|WP_033159801.1| signal recognition particle protein [Mycoplasma alvi]269/442 (60%)13960.0e+00
ref|WP_027119823.1| signal recognition particle protein [Mycoplasma testudinis]269/450 (59%)13710.0e+00
ref|WP_014574681.1| signal recognition particle protein [Mycoplasma gallisepticum]263/442 (59%)13510.0e+00


Maintained by Jun Ishikawa