General features
| Gene ID | MYPE9950
|
| Type | CDS
|
| From | 1317311
|
| To | 1317093
|
| Strand | -
|
| General name | infA
|
| Definition | translation initiation factor IF-1
|
| nt length | 219
|
| aa length | 72
|
| m.w. | 8033.44
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN187 infA initiation factor 1 230343:230579 | 80 | 7.4e-24
|
| mgen | WP_009885858.1 translation initiation factor IF-1 [Mycoplasma genitalium] | 73 | 4.7e-21
|
| mpul | WP_010925366.1 translation initiation factor IF-1 [Mycoplasma pulmonis] | 65 | 1.0e-17
|
| mmob | WP_011264777.1 translation initiation factor IF-1 [Mycoplasma mobile] | 78 | 6.1e-23
|
| mmyc | YP_003856775.1 translation initiation factor IF-1 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 80 | 1.8e-23
|
| mgal | WP_011113891.1 translation initiation factor IF-1 [Mycoplasma gallisepticum] | 90 | 1.5e-27
|
| uure | WP_004025652.1 translation initiation factor IF-1 [Ureaplasma urealyticum] | 91 | 3.8e-28
|
| phyt | WP_011160598.1 MULTISPECIES: translation initiation factor IF-1 [Candidatus Phytoplasma asteris] | 75 | 6.5e-22
|
| bsub | NP_388020.1 initiation factor IF-I [Bacillus subtilis subsp. subtilis str. 168] | 81 | 1.7e-23
|
| cace | WP_010966389.1 MULTISPECIES: translation initiation factor IF-1 [Clostridium] | 77 | 5.1e-22
|
| ecoli | NP_415404.1 translation initiation factor IF-1 [Escherichia coli str. K-12 substr. MG1655] | 71 | 1.8e-19
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| eIF-1a | 1 | Translation initiation factor 1A / IF-1 | 9-70 | 75.2 | 2.5e-21
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077809.1| translation initiation factor IF-1 [Mycoplasma penetrans] | 72/72 (100%) | 355 | 1.5e-42
|
| ref|WP_004024682.1| translation initiation factor IF-1 [Mycoplasma iowae] | 63/72 (87%) | 310 | 1.1e-35
|
| ref|WP_038101504.1| translation initiation factor IF-1 [Ureaplasma diversum] | 45/70 (64%) | 238 | 1.2e-24
|
| ref|WP_031489021.1| translation initiation factor IF-1 [Ureaplasma canigenitalium] | 46/70 (65%) | 233 | 7.8e-24
|
| ref|WP_027120107.1| translation initiation factor IF-1 [Mycoplasma testudinis] | 47/69 (68%) | 230 | 2.2e-23
|
| ref|WP_006688844.1| translation initiation factor IF-1 [Ureaplasma parvum] | 44/70 (62%) | 227 | 6.3e-23
|
| ref|WP_095543846.1| translation initiation factor IF-1 [Candidatus Izimaplasma sp. ZiA1] | 47/70 (67%) | 226 | 6.9e-23
|
| ref|WP_004025652.1| translation initiation factor IF-1 [Ureaplasma urealyticum] | 44/70 (62%) | 226 | 9.1e-23
|
| ref|WP_027124200.1| translation initiation factor IF-1 [Mycoplasma pirum] | 46/71 (64%) | 225 | 1.1e-22
|
| ref|WP_011113891.1| translation initiation factor IF-1 [Mycoplasma gallisepticum] | 44/68 (64%) | 222 | 3.3e-22
|
Maintained by Jun Ishikawa