General features
| Gene ID | MYPE9930
|
| Type | CDS
|
| From | 1316552
|
| To | 1316181
|
| Strand | -
|
| General name | rpsK
|
| Definition | ribosomal protein S11
|
| nt length | 372
|
| aa length | 123
|
| m.w. | 12736.52
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN190 rpsK ribosomal protein S11 231077:231442 | 144 | 9.8e-48
|
| mgen | WP_009885861.1 30S ribosomal protein S11 [Mycoplasma genitalium] | 138 | 2.0e-45
|
| mpul | WP_010925363.1 30S ribosomal protein S11 [Mycoplasma pulmonis] | 126 | 2.1e-40
|
| mmob | WP_011264780.1 30S ribosomal protein S11 [Mycoplasma mobile] | 129 | 2.4e-41
|
| mmyc | NP_975698.1 30S ribosomal protein S11 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 138 | 6.4e-45
|
| mgal | WP_011113888.1 30S ribosomal protein S11 [Mycoplasma gallisepticum] | 154 | 1.1e-51
|
| uure | WP_004026006.1 MULTISPECIES: 30S ribosomal protein S11 [Ureaplasma] | 157 | 7.0e-53
|
| phyt | WP_011160601.1 MULTISPECIES: 30S ribosomal protein S11 [Candidatus Phytoplasma asteris] | 131 | 1.1e-42
|
| bsub | NP_388023.1 ribosomal protein S11 (BS11) [Bacillus subtilis subsp. subtilis str. 168] | 139 | 1.0e-44
|
| cace | WP_010966387.1 MULTISPECIES: 30S ribosomal protein S11 [Clostridium] | 132 | 4.9e-42
|
| ecoli | NP_417756.1 30S ribosomal subunit protein S11 [Escherichia coli str. K-12 substr. MG1655] | 139 | 8.1e-45
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_S11 | 1 | Ribosomal protein S11 | 14-123 | 148.4 | 9e-44
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077807.1| 30S ribosomal protein S11 [Mycoplasma penetrans] | 123/123 (100%) | 621 | 1.6e-81
|
| ref|WP_129374478.1| 30S ribosomal protein S11 [Mycoplasma penetrans] | 122/123 (99%) | 618 | 4.5e-81
|
| ref|WP_031489018.1| 30S ribosomal protein S11 [Ureaplasma canigenitalium] | 79/119 (66%) | 433 | 7.2e-53
|
| ref|WP_004024679.1| 30S ribosomal protein S11 [Mycoplasma iowae] | 108/123 (87%) | 429 | 3.4e-52
|
| ref|WP_027124197.1| 30S ribosomal protein S11 [Mycoplasma pirum] | 77/119 (64%) | 425 | 1.1e-51
|
| ref|WP_027120109.1| 30S ribosomal protein S11 [Mycoplasma testudinis] | 85/119 (71%) | 409 | 3.8e-49
|
| ref|WP_005227104.1| MULTISPECIES: 30S ribosomal protein S11 [Enterococcus] | 75/123 (60%) | 406 | 1.3e-48
|
| ref|WP_013669034.1| MULTISPECIES: 30S ribosomal protein S11 [Aerococcus] | 73/122 (59%) | 405 | 2.0e-48
|
| ref|WP_054115712.1| MULTISPECIES: 30S ribosomal protein S11 [unclassified Enterococcus] | 74/123 (60%) | 405 | 2.2e-48
|
| ref|WP_107803616.1| 30S ribosomal protein S11 [Nitrosomonas oligotropha] | 74/120 (61%) | 404 | 2.4e-48
|
Maintained by Jun Ishikawa