General features
| Gene ID | MYPE9910
|
| Type | CDS
|
| From | 1315160
|
| To | 1314801
|
| Strand | -
|
| General name | rpsQ
|
| Definition | ribosomal protein L17
|
| nt length | 360
|
| aa length | 119
|
| m.w. | 13530.70
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN192 rplQ ribosomal protein L17 232434:232808 | 127 | 3.9e-41
|
| mgen | WP_010869362.1 50S ribosomal protein L17 [Mycoplasma genitalium] | 127 | 4.8e-41
|
| mpul | WP_010925361.1 50S ribosomal protein L17 [Mycoplasma pulmonis] | 109 | 8.6e-34
|
| mmob | WP_011264782.1 50S ribosomal protein L17 [Mycoplasma mobile] | 96 | 1.2e-28
|
| mmyc | NP_975696.1 50S ribosomal protein L17 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 120 | 2.7e-38
|
| mgal | WP_011113886.1 50S ribosomal protein L17 [Mycoplasma gallisepticum] | 145 | 9.8e-48
|
| uure | WP_004026179.1 MULTISPECIES: 50S ribosomal protein L17 [Ureaplasma] | 165 | 4.5e-56
|
| phyt | WP_011160603.1 MULTISPECIES: 50S ribosomal protein L17 [Candidatus Phytoplasma] | 89 | 4.2e-26
|
| bsub | NP_388025.1 ribosomal protein L17 (BL15) [Bacillus subtilis subsp. subtilis str. 168] | 95 | 1.1e-27
|
| cace | WP_010966384.1 MULTISPECIES: 50S ribosomal protein L17 [Clostridium] | 92 | 1.3e-26
|
| ecoli | NP_417753.1 50S ribosomal subunit protein L17 [Escherichia coli str. K-12 substr. MG1655] | 85 | 1.9e-23
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L17 | 1 | Ribosomal protein L17 | 18-119 | 114.0 | 4.5e-33
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077805.1| 50S ribosomal protein L17 [Mycoplasma penetrans] | 119/119 (100%) | 601 | 1.3e-78
|
| ref|WP_004024677.1| 50S ribosomal protein L17 [Mycoplasma iowae] | 88/119 (73%) | 457 | 1.4e-56
|
| ref|WP_038101496.1| 50S ribosomal protein L17 [Ureaplasma diversum] | 85/119 (71%) | 438 | 1.0e-53
|
| ref|WP_004026179.1| MULTISPECIES: 50S ribosomal protein L17 [Ureaplasma] | 80/119 (67%) | 418 | 1.1e-50
|
| ref|WP_088437615.1| 50S ribosomal protein L17 [Ureaplasma parvum] | 80/119 (67%) | 415 | 3.9e-50
|
| ref|WP_031489016.1| 50S ribosomal protein L17 [Ureaplasma canigenitalium] | 78/119 (65%) | 400 | 6.1e-48
|
| ref|WP_027121767.1| 50S ribosomal protein L17 [Mycoplasma imitans] | 71/119 (59%) | 384 | 7.3e-45
|
| ref|WP_065165097.1| 50S ribosomal protein L17 [Mycoplasma gallisepticum] | 71/119 (59%) | 376 | 9.3e-44
|
| ref|WP_011883399.1| 50S ribosomal protein L17 [Mycoplasma gallisepticum] | 71/119 (59%) | 376 | 1.1e-43
|
| ref|WP_011113886.1| 50S ribosomal protein L17 [Mycoplasma gallisepticum] | 69/119 (57%) | 367 | 2.1e-42
|
Maintained by Jun Ishikawa