General features
| Gene ID | MYPE9580
|
| Type | CDS
|
| From | 1281012
|
| To | 1280134
|
| Strand | -
|
| General name | tsf
|
| Definition | elongation factor Ts
|
| nt length | 879
|
| aa length | 292
|
| m.w. | 32333.07
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN631 tsf elongation factor Ts 757870:758766 | 196 | 3.3e-63
|
| mgen | WP_009885600.1 translation elongation factor Ts [Mycoplasma genitalium] | 185 | 5.8e-59
|
| mpul | WP_010925333.1 elongation factor Ts [Mycoplasma pulmonis] | 240 | 3.2e-80
|
| mmob | WP_011264697.1 elongation factor Ts [Mycoplasma mobile] | 174 | 1.6e-54
|
| mmyc | NP_975587.1 elongation factor Ts [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 228 | 1.9e-75
|
| mgal | WP_011113317.1 elongation factor Ts [Mycoplasma gallisepticum] | 243 | 3.3e-81
|
| uure | WP_012560312.1 elongation factor Ts [Ureaplasma urealyticum] | 251 | 1.1e-84
|
| phyt | WP_034172106.1 MULTISPECIES: elongation factor Ts [Candidatus Phytoplasma asteris] | 217 | 9.6e-72
|
| bsub | NP_389532.1 elongation factor Ts [Bacillus subtilis subsp. subtilis str. 168] | 228 | 7.0e-75
|
| cace | WP_010965094.1 MULTISPECIES: elongation factor Ts [Clostridium] | 188 | 2.5e-59
|
| ecoli | NP_414712.1 protein chain elongation factor EF-Ts [Escherichia coli str. K-12 substr. MG1655] | 191 | 1.1e-60
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| EF_TS | 1 | Elongation factor TS | 71-273 | 206.3 | 3.7e-61
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077774.1| elongation factor Ts [Mycoplasma penetrans] | 292/292 (100%) | 1502 | 0.0e+00
|
| ref|WP_004024710.1| elongation factor Ts [Mycoplasma iowae] | 176/292 (60%) | 807 | 2.3e-104
|
| ref|WP_009381729.1| elongation factor Ts [Staphylococcus massiliensis] | 151/292 (51%) | 724 | 7.1e-92
|
| ref|WP_022796451.1| elongation factor Ts [Bavariicoccus seileri] | 145/290 (50%) | 722 | 1.4e-91
|
| ref|WP_106700901.1| elongation factor Ts [Tenericutes bacterium MZ-XQ] | 144/292 (49%) | 719 | 4.2e-91
|
| ref|WP_026655661.1| elongation factor Ts [Acholeplasma palmae] | 142/292 (48%) | 719 | 4.5e-91
|
| ref|WP_103266795.1| elongation factor Ts [Staphylococcus succinus] | 147/291 (50%) | 714 | 2.8e-90
|
| ref|WP_095543739.1| elongation factor Ts [Candidatus Izimaplasma sp. ZiA1] | 140/292 (47%) | 713 | 3.1e-90
|
| ref|WP_073504599.1| elongation factor Ts [Staphylococcus succinus] | 147/291 (50%) | 710 | 1.2e-89
|
| ref|WP_052999231.1| elongation factor Ts [Staphylococcus aureus] | 142/290 (48%) | 708 | 2.0e-89
|
Maintained by Jun Ishikawa