General features
| Gene ID | MYPE9560
|
| Type | CDS
|
| From | 1279098
|
| To | 1278547
|
| Strand | -
|
| General name | frr
|
| Definition | ribosome releasing/ recycling factor
|
| nt length | 552
|
| aa length | 183
|
| m.w. | 21631.68
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN636 frr ribosome releasing factor 762639:763193 | 132 | 2.6e-41
|
| mgen | WP_010869481.1 ribosome recycling factor [Mycoplasma genitalium] | 124 | 5.5e-38
|
| mpul | WP_010925023.1 ribosome recycling factor [Mycoplasma pulmonis] | 98 | 1.1e-27
|
| mmob | WP_011264575.1 ribosome recycling factor [Mycoplasma mobile] | 103 | 5.6e-30
|
| mmyc | NP_975581.1 ribosome recycling factor [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 98 | 5.0e-28
|
| mgal | WP_011113319.1 ribosome recycling factor [Mycoplasma gallisepticum] | 154 | 9.2e-50
|
| uure | WP_012560274.1 ribosome recycling factor [Ureaplasma urealyticum] | 151 | 1.0e-48
|
| phyt | WP_011160543.1 MULTISPECIES: ribosome-recycling factor [Candidatus Phytoplasma asteris] | 115 | 1.9e-34
|
| bsub | NP_389534.1 ribosome recycling factor [Bacillus subtilis subsp. subtilis str. 168] | 135 | 1.2e-41
|
| cace | WP_010965096.1 MULTISPECIES: ribosome recycling factor [Clostridium] | 122 | 1.2e-36
|
| ecoli | NP_414714.1 ribosome-recycling factor [Escherichia coli str. K-12 substr. MG1655] | 109 | 2.7e-31
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| RRF | 1 | Ribosome recycling factor | 22-181 | 167.3 | 2.6e-49
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077772.1| ribosome recycling factor [Mycoplasma penetrans] | 183/183 (100%) | 933 | 4.8e-127
|
| ref|WP_036451350.1| ribosome recycling factor [Mycoplasma iowae] | 116/181 (64%) | 606 | 3.1e-77
|
| ref|WP_004024708.1| ribosome recycling factor [Mycoplasma iowae] | 115/181 (63%) | 602 | 1.1e-76
|
| ref|WP_065165665.1| ribosome recycling factor [Mycoplasma gallisepticum] | 79/183 (43%) | 392 | 8.9e-45
|
| ref|WP_031489146.1| ribosome recycling factor [Ureaplasma canigenitalium] | 74/183 (40%) | 391 | 1.2e-44
|
| ref|WP_051749382.1| ribosome recycling factor [Ureaplasma diversum] | 72/183 (39%) | 390 | 1.8e-44
|
| ref|WP_011113319.1| ribosome recycling factor [Mycoplasma gallisepticum] | 79/183 (43%) | 390 | 2.0e-44
|
| ref|WP_011883751.1| ribosome recycling factor [Mycoplasma gallisepticum] | 79/183 (43%) | 389 | 2.8e-44
|
| ref|WP_027122408.1| ribosome recycling factor [Mycoplasma imitans] | 78/183 (42%) | 388 | 3.3e-44
|
| ref|WP_014885827.1| ribosome recycling factor [Mycoplasma gallisepticum] | 78/183 (42%) | 387 | 5.8e-44
|
Maintained by Jun Ishikawa