General features

Gene IDMYPE9430
TypeCDS
From1265659
To1263983
Strand-
General name
Definitionribonuclease J
nt length1677
aa length558
m.w.63369.89
COG[R] General function prediction only

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN621 metallo hydrolase-like protein 749427:7477423391.1e-111
mgenWP_010869479.1 RNase J family beta-CASP ribonuclease [Mycoplasma genitalium]3541.6e-117
mpulWP_010925506.1 ribonuclease J [Mycoplasma pulmonis]2009.4e-59
mmobWP_011265141.1 ribonuclease J [Mycoplasma mobile]1801.6e-51
mmycNP_975299.1 hypothetical protein MSC_0300 [Mycoplasma mycoides subsp. mycoides SC str. PG1]2241.3e-67
mgalWP_011113312.1 ribonuclease J [Mycoplasma gallisepticum]2851.2e-90
uureWP_004025801.1 ribonuclease J [Ureaplasma urealyticum]3231.2e-105
ecoliNP_415118.1 apo-serine activating enzyme [Escherichia coli str. K-12 substr. MG1655]333.6e-02

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; ecoli, Escherichia coli K-12;

Pfam search result:

no hits.

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077759.1| ribonuclease J [Mycoplasma penetrans]558/558 (100%)29030.0e+00
ref|WP_036451603.1| ribonuclease J [Mycoplasma iowae]314/557 (56%)17230.0e+00
ref|WP_004024907.1| ribonuclease J [Mycoplasma iowae]313/557 (56%)17160.0e+00
ref|WP_052663969.1| ribonuclease J [Mycoplasma alvi]213/556 (38%)9723.1e-121
ref|WP_052663121.1| ribonuclease J [Mycoplasma pirum]207/556 (37%)9332.6e-115
ref|WP_010869479.1| RNase J family beta-CASP ribonuclease [Mycoplasma genitalium]204/557 (36%)9085.5e-112
ref|WP_014894071.1| RNase J family beta-CASP ribonuclease [Mycoplasma genitalium]205/557 (36%)9078.0e-112
ref|WP_014894511.1| RNase J family beta-CASP ribonuclease [Mycoplasma genitalium]205/557 (36%)9061.1e-111
ref|WP_014894333.1| RNase J family beta-CASP ribonuclease [Mycoplasma genitalium]204/557 (36%)9033.0e-111
ref|WP_027119425.1| ribonuclease J [Mycoplasma testudinis]203/557 (36%)8921.4e-109

Maintained by Jun Ishikawa