General features
| Gene ID | MYPE9380
|
| Type | CDS
|
| From | 1258371
|
| To | 1255108
|
| Strand | -
|
| General name | metS
|
| Definition | methionyl-tRNA synthetase
|
| nt length | 3264
|
| aa length | 1087
|
| m.w. | 126305.14
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN023 metS methionyl-tRNA synthetase 28245:29783 | 380 | 2.8e-122
|
| mgen | WP_009885919.1 methionine--tRNA ligase [Mycoplasma genitalium] | 377 | 1.6e-121
|
| mpul | WP_010925291.1 methionine--tRNA ligase [Mycoplasma pulmonis] | 400 | 1.0e-129
|
| mmob | WP_041362864.1 methionine--tRNA ligase [Mycoplasma mobile] | 323 | 4.0e-101
|
| mmyc | NP_975023.1 methionyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 446 | 2.9e-147
|
| mgal | WP_011113389.1 methionine--tRNA ligase [Mycoplasma gallisepticum] | 440 | 6.7e-144
|
| uure | WP_004026240.1 methionine--tRNA ligase [Ureaplasma urealyticum] | 515 | 9.2e-174
|
| phyt | WP_011160608.1 methionine--tRNA ligase [Onion yellows phytoplasma] | 295 | 1.3e-90
|
| bsub | NP_387919.1 methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] | 399 | 1.0e-126
|
| cace | WP_010966273.1 MULTISPECIES: methionine--tRNA ligase [Clostridium] | 367 | 3.2e-115
|
| ecoli | NP_416617.1 methionine--tRNA ligase [Escherichia coli str. K-12 substr. MG1655] | 192 | 4.7e-52
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA-synt_1g | 1 | tRNA synthetases class I (M) | 572-935 | 339.4 | 2.3e-101
|
| tRNA-synt_1 | 2 | tRNA synthetases class I (I, L, M and V) | 563-700, 791-902 | 90.0 | 1.1e-25
|
| Aminotran_5 | 1 | Aminotransferase class-V | 225-549 | 85.5 | 3.4e-24
|
| tRNA-synt_1e | 1 | tRNA synthetases class I (C) catalytic domain | 571-713 | 49.1 | 5e-13
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_083755103.1| methionine--tRNA ligase [Mycoplasma penetrans] | 1080/1080 (100%) | 5669 | 0.0e+00
|
| ref|WP_004025169.1| methionine--tRNA ligase [Mycoplasma iowae] | 262/513 (51%) | 1405 | 3.3e-180
|
| ref|WP_031489091.1| methionine--tRNA ligase [Ureaplasma canigenitalium] | 264/521 (50%) | 1387 | 1.4e-177
|
| ref|WP_004025641.1| methionine--tRNA ligase [Ureaplasma urealyticum] | 256/514 (49%) | 1339 | 2.0e-170
|
| ref|WP_006688946.1| methionine--tRNA ligase [Ureaplasma parvum] | 255/514 (49%) | 1332 | 2.3e-169
|
| ref|WP_006689328.1| methionine--tRNA ligase [Ureaplasma parvum] | 254/514 (49%) | 1330 | 4.2e-169
|
| ref|WP_004026240.1| methionine--tRNA ligase [Ureaplasma urealyticum] | 253/514 (49%) | 1326 | 2.2e-168
|
| ref|WP_004027063.1| methionine--tRNA ligase [Ureaplasma urealyticum] | 253/514 (49%) | 1323 | 5.3e-168
|
| ref|WP_045470582.1| methionine--tRNA ligase [Ureaplasma parvum] | 254/514 (49%) | 1320 | 1.5e-167
|
| ref|WP_038102635.1| methionine--tRNA ligase [Ureaplasma diversum] | 247/518 (47%) | 1278 | 1.8e-161
|
Maintained by Jun Ishikawa