General features
| Gene ID | MYPE9260
|
| Type | CDS
|
| From | 1244337
|
| To | 1242034
|
| Strand | -
|
| General name | pheT
|
| Definition | phenylalanyl-tRNA synthetase subunit beta
|
| nt length | 2304
|
| aa length | 767
|
| m.w. | 87268.53
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN106 pheT phenylalanyl-tRNA synthetase beta chain 136759:139176 | 248 | 1.0e-72
|
| mgen | WP_009885736.1 phenylalanine--tRNA ligase subunit beta [Mycoplasma genitalium] | 229 | 2.7e-66
|
| mpul | WP_010925151.1 phenylalanine--tRNA ligase subunit beta [Mycoplasma pulmonis] | 219 | 5.6e-63
|
| mmob | WP_011265036.1 phenylalanine--tRNA ligase subunit beta [Mycoplasma mobile] | 146 | 3.7e-38
|
| mmyc | NP_975576.1 phenylalanyl-tRNA synthetase subunit beta [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 120 | 1.7e-29
|
| mgal | WP_011113608.1 phenylalanine--tRNA ligase subunit beta [Mycoplasma gallisepticum] | 297 | 9.1e-91
|
| uure | WP_012560275.1 phenylalanine--tRNA ligase subunit beta [Ureaplasma urealyticum] | 236 | 1.0e-68
|
| bsub | NP_390741.1 phenylalanyl-tRNA synthetase (beta subunit) [Bacillus subtilis subsp. subtilis str. 168] | 225 | 6.5e-64
|
| cace | WP_010965653.1 MULTISPECIES: phenylalanine--tRNA ligase subunit beta [Clostridium] | 180 | 2.0e-48
|
| ecoli | NP_416228.1 phenylalanine--tRNA ligase subunit beta [Escherichia coli str. K-12 substr. MG1655] | 185 | 5.8e-50
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| B3_4 | 1 | B3/4 domain | 195-365 | 129.2 | 1.2e-37
|
| tRNA_synthFbeta | 1 | Phenylalanyl tRNA synthetase beta chain CLM domain | 470-656 | 79.6 | 2.1e-22
|
| tRNA_bind | 1 | Putative tRNA binding domain | 21-122 | 63.9 | 1.1e-17
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_044891314.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma penetrans] | 767/767 (100%) | 3900 | 0.0e+00
|
| ref|WP_129692693.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma iowae] | 324/755 (42%) | 1346 | 1.1e-171
|
| ref|WP_036452650.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma iowae] | 324/755 (42%) | 1346 | 1.1e-171
|
| ref|WP_040538207.1| hypothetical protein [Mycoplasma iowae] | 224/561 (39%) | 857 | 1.1e-101
|
| ref|WP_027123981.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma pirum] | 270/766 (35%) | 824 | 3.1e-94
|
| ref|WP_027119474.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma testudinis] | 238/717 (33%) | 810 | 8.1e-92
|
| ref|WP_014574622.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma gallisepticum] | 249/754 (33%) | 774 | 2.5e-87
|
| ref|WP_065165699.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma gallisepticum] | 247/754 (32%) | 769 | 1.3e-86
|
| ref|WP_151059711.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma gallisepticum] | 248/754 (32%) | 769 | 1.5e-86
|
| ref|WP_151029793.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma gallisepticum] | 248/754 (32%) | 762 | 1.4e-85
|
Maintained by Jun Ishikawa