General features
| Gene ID | MYPE9160
|
| Type | CDS
|
| From | 1227452
|
| To | 1226940
|
| Strand | -
|
| General name | infC
|
| Definition | translation initiation factor IF3
|
| nt length | 513
|
| aa length | 170
|
| m.w. | 19631.90
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN115 infC translation initiation factor IF3 150643:151248 | 138 | 1.4e-43
|
| mgen | WP_009885737.1 translation initiation factor IF-3 [Mycoplasma genitalium] | 143 | 7.0e-46
|
| mpul | WP_129690527.1 translation initiation factor IF-3 [Mycoplasma pulmonis] | 97 | 1.5e-27
|
| mmob | WP_011265149.1 translation initiation factor IF-3 [Mycoplasma mobile] | 101 | 6.3e-29
|
| mmyc | NP_975222.1 translation initiation factor IF-3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 118 | 1.1e-35
|
| mgal | WP_011113603.1 translation initiation factor IF-3 [Mycoplasma gallisepticum] | 115 | 1.7e-34
|
| uure | WP_004025505.1 translation initiation factor IF-3 [Ureaplasma urealyticum] | 155 | 2.1e-50
|
| bsub | NP_390765.1 initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. 168] | 106 | 1.9e-30
|
| cace | WP_010965658.1 MULTISPECIES: translation initiation factor IF-3 [Clostridium] | 91 | 9.5e-25
|
| ecoli | NP_416233.1 translation initiation factor IF-3 [Escherichia coli str. K-12 substr. MG1655] | 70 | 1.3e-16
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| IF3_N | 1 | Translation initiation factor IF-3, N-terminal domain | 7-74 | 79.4 | 1.8e-22
|
| IF3_C | 1 | Translation initiation factor IF-3, C-terminal domain | 82-154 | 60.6 | 1.1e-16
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077735.1| translation initiation factor IF-3 [Mycoplasma penetrans] | 170/170 (100%) | 867 | 1.9e-117
|
| ref|WP_004025159.1| translation initiation factor IF-3 [Mycoplasma iowae] | 129/170 (75%) | 606 | 1.3e-77
|
| ref|WP_004025505.1| translation initiation factor IF-3 [Ureaplasma urealyticum] | 83/169 (49%) | 393 | 5.0e-45
|
| ref|WP_006688881.1| translation initiation factor IF-3 [Ureaplasma parvum] | 83/169 (49%) | 392 | 6.2e-45
|
| ref|WP_031489058.1| translation initiation factor IF-3 [Ureaplasma canigenitalium] | 79/160 (49%) | 373 | 9.5e-42
|
| ref|WP_014894620.1| translation initiation factor IF-3 [Mycoplasma genitalium] | 65/167 (38%) | 363 | 1.3e-40
|
| ref|WP_009885737.1| translation initiation factor IF-3 [Mycoplasma genitalium] | 64/167 (38%) | 361 | 2.4e-40
|
| ref|WP_038101999.1| translation initiation factor IF-3 [Ureaplasma diversum] | 78/160 (48%) | 361 | 2.6e-40
|
| ref|WP_053344094.1| translation initiation factor IF-3 [Mycoplasma pneumoniae] | 64/167 (38%) | 351 | 1.7e-38
|
| ref|WP_014325354.1| translation initiation factor IF-3 [Mycoplasma pneumoniae] | 65/167 (38%) | 350 | 1.9e-38
|
Maintained by Jun Ishikawa