General features
| Gene ID | MYPE8960
|
| Type | CDS
|
| From | 1204546
|
| To | 1203839
|
| Strand | -
|
| General name | grpE
|
| Definition | nucleptide exchange factor GrpE
|
| nt length | 708
|
| aa length | 235
|
| m.w. | 27105.46
|
| COG | [O] Posttranslational modification, protein turnover, chaperones
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN120 grpE heat shock protein GrpE 155323:155976 | 103 | 5.2e-29
|
| mgen | WP_009885741.1 nucleotide exchange factor GrpE [Mycoplasma genitalium] | 93 | 4.0e-25
|
| mpul | WP_050780360.1 nucleotide exchange factor GrpE [Mycoplasma pulmonis] | 40 | 8.1e-06
|
| mmob | WP_011264632.1 nucleotide exchange factor GrpE [Mycoplasma mobile] | 77 | 1.7e-18
|
| mmyc | NP_975591.1 heat shock protein GrpE [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 63 | 1.1e-13
|
| mgal | WP_011113576.1 nucleotide exchange factor GrpE [Mycoplasma gallisepticum] | 97 | 2.1e-25
|
| uure | WP_004025911.1 nucleotide exchange factor GrpE [Ureaplasma urealyticum] | 78 | 2.0e-19
|
| phyt | WP_011161047.1 nucleotide exchange factor GrpE [Onion yellows phytoplasma] | 48 | 7.6e-09
|
| bsub | NP_390426.1 nucleotide exchange factor for DnaK activity [Bacillus subtilis subsp. subtilis str. 168] | 49 | 2.2e-08
|
| cace | WP_010964593.1 MULTISPECIES: nucleotide exchange factor GrpE [Clostridium] | 41 | 8.9e-06
|
| ecoli | NP_417104.1 nucleotide exchange factor GrpE [Escherichia coli str. K-12 substr. MG1655] | 43 | 2.7e-06
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| GrpE | 1 | GrpE | 67-235 | 131.1 | 3.1e-38
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077716.1| nucleotide exchange factor GrpE [Mycoplasma penetrans] | 235/235 (100%) | 1187 | 4.5e-164
|
| ref|WP_004024949.1| nucleotide exchange factor GrpE [Mycoplasma iowae] | 114/234 (48%) | 452 | 2.1e-52
|
| ref|WP_036452411.1| nucleotide exchange factor GrpE [Mycoplasma iowae] | 114/234 (48%) | 450 | 5.2e-52
|
| ref|WP_043902200.1| nucleotide exchange factor GrpE [Candidatus Mycoplasma haemominutum] | 68/178 (38%) | 259 | 4.3e-24
|
| ref|WP_054175781.1| nucleotide exchange factor GrpE [Mycoplasma pneumoniae] | 62/165 (37%) | 258 | 1.2e-23
|
| ref|WP_014325356.1| nucleotide exchange factor GrpE [Mycoplasma pneumoniae] | 62/165 (37%) | 258 | 1.3e-23
|
| ref|WP_010874477.1| nucleotide exchange factor GrpE [Mycoplasma pneumoniae] | 62/165 (37%) | 258 | 1.3e-23
|
| ref|WP_027122118.1| nucleotide exchange factor GrpE [Mycoplasma imitans] | 56/159 (35%) | 259 | 9.1e-23
|
| ref|WP_151029774.1| nucleotide exchange factor GrpE [Mycoplasma gallisepticum] | 55/156 (35%) | 251 | 1.6e-21
|
| ref|WP_014849920.1| nucleotide exchange factor GrpE [Mycoplasma wenyonii] | 53/147 (36%) | 237 | 1.1e-20
|
Maintained by Jun Ishikawa