General features
| Gene ID | MYPE8870
|
| Type | CDS
|
| From | 1194078
|
| To | 1192810
|
| Strand | -
|
| General name |
|
| Definition | ABC transporter permease
|
| nt length | 1269
|
| aa length | 422
|
| m.w. | 46797.50
|
| COG | [S] Function unknown
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN657 conserved hypothetical protein 783084:781879 | 186 | 3.3e-56
|
| mgen | WP_010869483.1 YitT family protein [Mycoplasma genitalium] | 201 | 3.5e-62
|
| mpul | WP_010924913.1 YitT family protein [Mycoplasma pulmonis] | 77 | 2.7e-17
|
| mmob | WP_083748439.1 YitT family protein [Mycoplasma mobile] | 80 | 2.3e-18
|
| mmyc | NP_975456.1 hypothetical protein MSC_0470 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 55 | 2.4e-10
|
| mgal | WP_011113882.1 YitT family protein [Mycoplasma gallisepticum] | 212 | 4.5e-66
|
| uure | WP_012560212.1 YitT family protein [Ureaplasma urealyticum] | 142 | 3.9e-39
|
| phyt | WP_011160560.1 hypothetical protein [Onion yellows phytoplasma] | 43 | 1.3e-06
|
| bsub | NP_388993.1 putative integral membrane protein [Bacillus subtilis subsp. subtilis str. 168] | 53 | 7.2e-09
|
| cace | WP_010963753.1 MULTISPECIES: YitT family protein [Clostridium] | 41 | 4.3e-05
|
| ecoli | NP_418776.1 galactonate:H(+) symporter [Escherichia coli str. K-12 substr. MG1655] | 29 | 5.7e-01
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| YitT_membrane | 1 | Uncharacterised 5xTM membrane BCR, YitT family COG1284 | 91-288 | 60.6 | 1.3e-16
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077707.1| YitT family protein [Mycoplasma penetrans] | 422/422 (100%) | 2184 | 0.0e+00
|
| ref|WP_129374424.1| YitT family protein [Mycoplasma penetrans] | 421/422 (99%) | 2180 | 0.0e+00
|
| ref|WP_004024781.1| hypothetical protein [Mycoplasma iowae] | 226/422 (53%) | 1046 | 6.1e-134
|
| ref|WP_129692655.1| hypothetical protein [Mycoplasma iowae] | 225/422 (53%) | 1036 | 2.4e-132
|
| ref|WP_036452178.1| membrane protein, partial [Mycoplasma iowae] | 222/414 (53%) | 1027 | 3.6e-131
|
| ref|WP_027121771.1| YitT family protein [Mycoplasma imitans] | 137/382 (35%) | 549 | 5.3e-62
|
| ref|WP_052663607.1| YitT family protein [Mycoplasma testudinis] | 137/385 (35%) | 550 | 1.2e-61
|
| ref|WP_014574761.1| YitT family protein [Mycoplasma gallisepticum] | 132/378 (34%) | 542 | 6.0e-61
|
| ref|WP_014886235.1| YitT family protein [Mycoplasma gallisepticum] | 133/378 (35%) | 541 | 7.0e-61
|
| ref|WP_065165092.1| YitT family protein [Mycoplasma gallisepticum] | 132/378 (34%) | 541 | 8.6e-61
|
Maintained by Jun Ishikawa