General features
| Gene ID | MYPE8780
|
| Type | CDS
|
| From | 1183321
|
| To | 1182077
|
| Strand | -
|
| General name | oppB
|
| Definition | oligopeptide ABC transporter permease protein
|
| nt length | 1245
|
| aa length | 414
|
| m.w. | 46304.12
|
| COG | [E] Amino acid transport and metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN215 oppB oligopeptide transport system permease protein OppB 265910:267079 | 284 | 2.3e-94
|
| mgen | WP_009885932.1 ABC transporter permease [Mycoplasma genitalium] | 273 | 2.3e-90
|
| mpul | WP_010925087.1 ABC transporter permease [Mycoplasma pulmonis] | 152 | 4.7e-44
|
| mmyc | NP_975183.1 oligopeptide ABC transporter permease [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 85 | 8.7e-20
|
| mgal | WP_011113772.1 ABC transporter permease [Mycoplasma gallisepticum] | 88 | 7.5e-21
|
| uure | WP_004027117.1 ABC transporter permease [Ureaplasma urealyticum] | 99 | 9.9e-25
|
| phyt | WP_011160565.1 MULTISPECIES: ABC transporter permease [Candidatus Phytoplasma asteris] | 127 | 2.4e-35
|
| bsub | NP_389021.2 oligopeptide ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] | 162 | 7.8e-48
|
| cace | WP_010966901.1 MULTISPECIES: ABC transporter permease [Clostridium] | 174 | 2.4e-52
|
| ecoli | NP_415760.1 murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB [Escherichia coli str. K-12 substr. MG1655] | 154 | 1.6e-44
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| BPD_transp_1 | 1 | Binding-protein-dependent transport system inner membrane component | 112-311 | 99.4 | 2e-28
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077698.1| ABC transporter permease [Mycoplasma penetrans] | 414/414 (100%) | 2127 | 0.0e+00
|
| ref|WP_129374421.1| ABC transporter permease [Mycoplasma penetrans] | 413/414 (99%) | 2125 | 0.0e+00
|
| ref|WP_027124193.1| ABC transporter permease [Mycoplasma pirum] | 213/406 (52%) | 1069 | 1.8e-140
|
| ref|WP_084269093.1| ABC transporter permease [Mycoplasma alvi] | 206/401 (51%) | 1018 | 7.2e-133
|
| ref|WP_010874572.1| ABC transporter permease [Mycoplasma pneumoniae] | 149/389 (38%) | 726 | 5.9e-89
|
| ref|WP_004025010.1| ABC transporter permease [Mycoplasma iowae] | 146/346 (42%) | 723 | 2.8e-88
|
| ref|WP_036451506.1| ABC transporter permease [Mycoplasma iowae] | 146/346 (42%) | 722 | 3.2e-88
|
| ref|WP_027122047.1| ABC transporter permease [Mycoplasma imitans] | 165/401 (41%) | 704 | 1.6e-85
|
| ref|WP_014894140.1| ABC transporter permease [Mycoplasma genitalium] | 149/385 (38%) | 700 | 4.5e-85
|
| ref|WP_009885932.1| ABC transporter permease [Mycoplasma genitalium] | 148/385 (38%) | 698 | 7.8e-85
|
Maintained by Jun Ishikawa