General features
| Gene ID | MYPE8770
|
| Type | CDS
|
| From | 1182073
|
| To | 1180895
|
| Strand | -
|
| General name | oppC
|
| Definition | oligopeptide ABC transporter permease protein
|
| nt length | 1179
|
| aa length | 392
|
| m.w. | 42872.97
|
| COG | [E] Amino acid transport and metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN216 amiD oligopeptide transport system permease protein AmiD 267072:268202 | 303 | 1.6e-102
|
| mgen | WP_009885933.1 ABC transporter permease [Mycoplasma genitalium] | 314 | 8.1e-107
|
| mmob | WP_011264970.1 ABC transporter permease [Mycoplasma mobile] | 141 | 6.5e-40
|
| mmyc | NP_975933.1 oligopeptide ABC transporter permease [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 82 | 4.7e-19
|
| mgal | WP_011113764.1 ABC transporter permease [Mycoplasma gallisepticum] | 286 | 7.3e-96
|
| uure | WP_004027173.1 ABC transporter permease [Ureaplasma urealyticum] | 75 | 9.5e-17
|
| bsub | NP_389027.1 oligopeptide ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] | 106 | 3.7e-27
|
| cace | WP_010966893.1 MULTISPECIES: ABC transporter permease [Clostridium] | 105 | 5.9e-27
|
| ecoli | NP_415353.1 glutathione ABC transporter membrane subunit GsiD [Escherichia coli str. K-12 substr. MG1655] | 87 | 3.7e-20
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| BPD_transp_1 | 1 | Binding-protein-dependent transport system inner membrane component | 200-389 | 76.8 | 1.7e-21
|
| OppC_N | 1 | N-terminal TM domain of oligopeptide transport permease C | 45-79 | 34.9 | 1.1e-08
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077697.1| ABC transporter permease [Mycoplasma penetrans] | 392/392 (100%) | 1997 | 0.0e+00
|
| ref|WP_129374420.1| ABC transporter permease [Mycoplasma penetrans] | 391/392 (99%) | 1993 | 0.0e+00
|
| ref|WP_052664045.1| ABC transporter permease [Mycoplasma alvi] | 219/390 (56%) | 1041 | 5.3e-137
|
| ref|WP_052663114.1| ABC transporter permease [Mycoplasma pirum] | 204/390 (52%) | 944 | 3.3e-122
|
| ref|WP_014894384.1| ABC transporter permease [Mycoplasma genitalium] | 174/370 (47%) | 810 | 4.0e-102
|
| ref|WP_009885933.1| ABC transporter permease [Mycoplasma genitalium] | 173/370 (46%) | 804 | 2.7e-101
|
| ref|WP_014894141.1| ABC transporter permease [Mycoplasma genitalium] | 173/370 (46%) | 803 | 4.9e-101
|
| ref|WP_014894564.1| ABC transporter permease [Mycoplasma genitalium] | 172/370 (46%) | 801 | 1.0e-100
|
| ref|WP_004025011.1| ABC transporter permease [Mycoplasma iowae] | 195/376 (51%) | 788 | 9.8e-99
|
| ref|WP_051790239.1| ABC transporter permease [Mycoplasma iowae] | 195/376 (51%) | 786 | 2.1e-98
|
Maintained by Jun Ishikawa