General features
| Gene ID | MYPE8530
|
| Type | CDS
|
| From | 1147238
|
| To | 1146810
|
| Strand | -
|
| General name |
|
| Definition | holiday junction resolvase RuvX
|
| nt length | 429
|
| aa length | 142
|
| m.w. | 16340.83
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN418 conserved hypothetical protein 503721:503299 | 57 | 3.3e-13
|
| mgen | WP_010869411.1 Holliday junction resolvase RuvX [Mycoplasma genitalium] | 60 | 3.2e-14
|
| mpul | WP_010925357.1 Holliday junction resolvase RuvX [Mycoplasma pulmonis] | 54 | 9.9e-12
|
| mmob | WP_011264958.1 Holliday junction resolvase RuvX [Mycoplasma mobile] | 37 | 1.2e-05
|
| mmyc | NP_975254.1 hypothetical protein MSC_0255 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 60 | 3.5e-14
|
| mgal | WP_011113352.1 Holliday junction resolvase RuvX [Mycoplasma gallisepticum] | 60 | 3.7e-14
|
| uure | WP_004025684.1 Holliday junction resolvase RuvX [Ureaplasma urealyticum] | 42 | 1.6e-07
|
| phyt | WP_101674491.1 Holliday junction resolvase RuvX [Onion yellows phytoplasma] | 60 | 4.0e-14
|
| bsub | NP_390617.1 pre-16S ribosomal RNA maturation enzyme [Bacillus subtilis subsp. subtilis str. 168] | 65 | 1.4e-15
|
| cace | WP_010964987.1 Holliday junction resolvase RuvX [Clostridium acetobutylicum] | 60 | 2.0e-13
|
| ecoli | NP_417424.1 ribonuclease H-like domain containing nuclease [Escherichia coli str. K-12 substr. MG1655] | 45 | 6.0e-08
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| RuvX | 1 | Holliday junction resolvase | 7-139 | 108.2 | 3.9e-31
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077674.1| Holliday junction resolvase RuvX [Mycoplasma penetrans] | 142/142 (100%) | 710 | 2.0e-94
|
| ref|WP_044875945.1| Holliday junction resolvase RuvX [Paenibacillus sp. IHBB 10380] | 53/135 (39%) | 231 | 1.4e-21
|
| ref|WP_068504922.1| Holliday junction resolvase RuvX [Paenibacillus kribbensis] | 46/132 (34%) | 227 | 4.0e-21
|
| ref|WP_121010647.1| Holliday junction resolvase RuvX [Hydrogenivirga caldilitoris] | 49/135 (36%) | 226 | 4.8e-21
|
| ref|WP_025717939.1| MULTISPECIES: Holliday junction resolvase RuvX [Paenibacillus] | 46/132 (34%) | 227 | 4.9e-21
|
| ref|WP_016819084.1| MULTISPECIES: Holliday junction resolvase RuvX [Paenibacillus] | 47/132 (35%) | 226 | 7.5e-21
|
| ref|WP_075758513.1| Holliday junction resolvase RuvX [Anaerostipes sp. 494a] | 51/136 (37%) | 225 | 8.8e-21
|
| ref|WP_013372607.1| Holliday junction resolvase RuvX [Paenibacillus polymyxa] | 47/132 (35%) | 225 | 9.8e-21
|
| ref|WP_063212034.1| MULTISPECIES: Holliday junction resolvase RuvX [Paenibacillus] | 47/132 (35%) | 224 | 1.2e-20
|
| ref|WP_043891218.1| MULTISPECIES: Holliday junction resolvase RuvX [Paenibacillus] | 45/132 (34%) | 224 | 1.4e-20
|
Maintained by Jun Ishikawa