General features

Gene IDMYPE850
TypeCDS
From102228
To100051
Strand-
General namenrdE
Definitionribonucleoside diphosphate reductase subunit alpha
nt length2178
aa length725
m.w.82542.14
COG[F] Nucleotide transport and metabolism

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN324 nrdE ribonucleoside-diphosphate reductase alpha chain 383525:3856909510.0e+00
mgenWP_009885768.1 class 1b ribonucleoside-diphosphate reductase subunit alpha [Mycoplasma genitalium]9390.0e+00
mpulWP_010925342.1 class 1b ribonucleoside-diphosphate reductase subunit alpha [Mycoplasma pulmonis]9270.0e+00
mmobWP_011264536.1 vitamin B12-dependent ribonucleotide reductase [Mycoplasma mobile]901.9e-20
mmycNP_975823.1 ribonucleotide-diphosphate reductase subunit alpha [Mycoplasma mycoides subsp. mycoides SC str. PG1]9400.0e+00
mgalWP_011113272.1 class 1b ribonucleoside-diphosphate reductase subunit alpha [Mycoplasma gallisepticum]9020.0e+00
bsubNP_389620.1 ribonucleoside-diphosphate reductase (major subunit) [Bacillus subtilis subsp. subtilis str. 168]5660.0e+00
caceWP_010966551.1 MULTISPECIES: ribonucleoside-diphosphate reductase subunit alpha [Clostridium]2481.1e-72
ecoliNP_417161.1 ribonucleoside-diphosphate reductase 2 subunit alpha [Escherichia coli str. K-12 substr. MG1655]8060.0e+00

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Ribonuc_red_lgC1Ribonucleotide reductase, barrel domain180-703474.34.3e-142

RNR_N1Ribonucleotide reductase N-terminal20-10183.48.6e-24

Ribonuc_red_lgN1Ribonucleotide reductase, all-alpha domain104-17536.44e-09

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011076912.1| class 1b ribonucleoside-diphosphate reductase subunit alpha [Mycoplasm...725/725 (100%)38760.0e+00
ref|WP_129374352.1| class 1b ribonucleoside-diphosphate reductase subunit alpha [Mycoplasm...724/725 (99%)38700.0e+00
ref|WP_162684567.1| class 1b ribonucleoside-diphosphate reductase subunit alpha [Spiroplas...484/717 (67%)26020.0e+00
ref|WP_023790193.1| class 1b ribonucleoside-diphosphate reductase subunit alpha [Spiroplas...477/710 (67%)25880.0e+00
ref|WP_101780403.1| class 1b ribonucleoside-diphosphate reductase subunit alpha [Spiroplas...481/717 (67%)25880.0e+00
ref|WP_020836040.1| class 1b ribonucleoside-diphosphate reductase subunit alpha [Spiroplas...477/710 (67%)25860.0e+00
ref|WP_025317509.1| MULTISPECIES: class 1b ribonucleoside-diphosphate reductase subunit al... [Spiroplasma]473/711 (66%)25810.0e+00
ref|WP_100916154.1| class 1b ribonucleoside-diphosphate reductase subunit alpha [Spiroplas...472/710 (66%)25750.0e+00
ref|WP_094048097.1| class 1b ribonucleoside-diphosphate reductase subunit alpha [Spiroplas...478/719 (66%)25730.0e+00
ref|WP_025363578.1| class 1b ribonucleoside-diphosphate reductase subunit alpha [Spiroplas...476/720 (66%)25700.0e+00

Maintained by Jun Ishikawa