General features
| Gene ID | MYPE8460
|
| Type | CDS
|
| From | 1138755
|
| To | 1134961
|
| Strand | -
|
| General name |
|
| Definition | DNA helicase-related protein
|
| nt length | 3795
|
| aa length | 1264
|
| m.w. | 148024.51
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN153 conserved hypothetical protein 202383:205724 | 165 | 5.5e-43
|
| mgen | WP_010869351.1 DUF4011 domain-containing protein [Mycoplasma genitalium] | 174 | 6.0e-46
|
| mpul | WP_010924926.1 DUF4011 domain-containing protein [Mycoplasma pulmonis] | 186 | 2.4e-49
|
| mmob | WP_011265019.1 putative ATP-binding helicase protein [Mycoplasma mobile] | 184 | 8.5e-49
|
| mmyc | NP_975637.1 hypothetical protein MSC_0658 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 125 | 1.1e-30
|
| mgal | WP_011113324.1 heavy metal transporter CzcA [Mycoplasma gallisepticum] | 145 | 1.6e-36
|
| uure | WP_004026373.1 DUF4011 domain-containing protein [Ureaplasma urealyticum] | 353 | 2.6e-103
|
| bsub | NP_388491.1 type-2 restriction enzyme BsuMI component BsuRB (YdiS); prophage region 3 [Bacillus subtilis subsp. subtilis str. 168] | 33 | 1.2e-01
|
| cace | WP_010966317.1 MULTISPECIES: AAA family ATPase [Clostridium] | 78 | 1.3e-15
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| DUF4011 | 1 | Protein of unknown function (DUF4011) | 10-195 | 81.4 | 6.6e-23
|
| AAA_12 | 1 | AAA domain | 918-1105 | 67.1 | 1.6e-18
|
| MTES_1575 | 1 | REase_MTES_1575 | 1155-1255 | 61.8 | 5.1e-17
|
| AAA_19 | 1 | AAA domain | 321-424 | 29.5 | 8.2e-07
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077667.1| DUF4011 domain-containing protein [Mycoplasma penetrans] | 1264/1264 (100%) | 6467 | 0.0e+00
|
| ref|WP_027124099.1| DUF4011 domain-containing protein [Mycoplasma pirum] | 508/1262 (40%) | 1824 | 0.0e+00
|
| ref|WP_088444139.1| DUF4011 domain-containing protein [Ureaplasma parvum] | 443/1249 (35%) | 1470 | 2.9e-177
|
| ref|WP_006688805.1| DUF4011 domain-containing protein [Ureaplasma parvum] | 443/1249 (35%) | 1469 | 3.7e-177
|
| ref|WP_010891818.1| DUF4011 domain-containing protein [Ureaplasma parvum] | 442/1249 (35%) | 1463 | 3.0e-176
|
| ref|WP_038103363.1| DUF4011 domain-containing protein [Ureaplasma diversum] | 448/1249 (35%) | 1444 | 1.6e-173
|
| ref|WP_051749487.1| DUF4011 domain-containing protein [Ureaplasma diversum] | 402/1202 (33%) | 1305 | 3.4e-154
|
| ref|WP_031489237.1| DUF4011 domain-containing protein [Ureaplasma canigenitalium] | 209/513 (40%) | 944 | 4.0e-103
|
| ref|WP_016829271.1| DUF4011 domain-containing protein [Ureaplasma urealyticum] | 246/680 (36%) | 908 | 2.3e-98
|
| ref|WP_004027416.1| DUF4011 domain-containing protein [Ureaplasma urealyticum] | 246/680 (36%) | 908 | 2.3e-98
|
Maintained by Jun Ishikawa