General features

Gene IDMYPE8190
TypeCDS
From1097228
To1098475
Strand+
General namehsdS
Definitiontype I restriction-modification system S subunit
nt length1248
aa length415
m.w.47484.70
COG[L] Replication, recombination and repair

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN290 hypothetical protein 347871:348308295.3e-02
mmobWP_011264805.1 restriction-modification enzyme mpuUVIII s subunit [Mycoplasma mobile]333.4e-03
caceWP_010966270.1 MULTISPECIES: DUF348 domain-containing protein [Clostridium]293.8e-01

*mpne, Mycoplasma pneumoniae; mmob, Mycoplasma mobile; cace, Clostridium acetobutylicum;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Methylase_S2Type I restriction modification DNA specificity domain2-141, 247-41285.83.8e-24

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_052270427.1| hypothetical protein [Mycoplasma penetrans]405/405 (100%)20670.0e+00
ref|WP_129374531.1| restriction endonuclease subunit S [Mycoplasma penetrans]277/367 (75%)12303.0e-163
ref|WP_101503962.1| restriction endonuclease subunit S [Brachyspira pilosicoli]167/359 (46%)7672.1e-93
ref|WP_118033995.1| restriction endonuclease subunit S [Bacteroides eggerthii]172/414 (41%)7431.4e-90
ref|WP_147759071.1| restriction endonuclease subunit S [Brachyspira aalborgi]163/374 (43%)6976.5e-83
ref|WP_149931441.1| restriction endonuclease subunit S [Bacteroides eggerthii]152/306 (49%)6857.3e-82
ref|WP_151882969.1| restriction endonuclease subunit S [Bacteroides uniformis]145/307 (47%)6821.6e-81
ref|WP_107812029.1| restriction endonuclease subunit S [Campylobacter concisus]157/356 (44%)6731.6e-80
ref|WP_149923688.1| restriction endonuclease subunit S [Bacteroides finegoldii]161/366 (43%)6714.1e-80
ref|WP_151411789.1| MULTISPECIES: restriction endonuclease subunit S [Bacteroidales]161/366 (43%)6725.1e-80

Maintained by Jun Ishikawa