General features
| Gene ID | MYPE810
|
| Type | CDS
|
| From | 96331
|
| To | 96771
|
| Strand | +
|
| General name | rplM
|
| Definition | ribosomal protein L13
|
| nt length | 441
|
| aa length | 146
|
| m.w. | 16556.24
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN617 rplM ribosomal protein L13 740268:739828 | 181 | 1.6e-61
|
| mgen | WP_010869476.1 50S ribosomal protein L13 [Mycoplasma genitalium] | 187 | 4.2e-64
|
| mpul | WP_010925296.1 50S ribosomal protein L13 [Mycoplasma pulmonis] | 143 | 2.0e-46
|
| mmob | WP_011264749.1 50S ribosomal protein L13 [Mycoplasma mobile] | 125 | 2.8e-39
|
| mmyc | NP_975690.1 50S ribosomal protein L13 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 122 | 3.1e-38
|
| mgal | WP_011113535.1 50S ribosomal protein L13 [Mycoplasma gallisepticum] | 192 | 9.3e-66
|
| uure | WP_012560238.1 50S ribosomal protein L13 [Ureaplasma urealyticum] | 194 | 2.0e-66
|
| phyt | WP_011160513.1 MULTISPECIES: 50S ribosomal protein L13 [Candidatus Phytoplasma asteris] | 117 | 1.6e-36
|
| bsub | NP_388030.2 ribosomal protein L13 [Bacillus subtilis subsp. subtilis str. 168] | 127 | 2.0e-39
|
| cace | WP_010966379.1 MULTISPECIES: 50S ribosomal protein L13 [Clostridium] | 125 | 7.6e-39
|
| ecoli | NP_417698.1 50S ribosomal subunit protein L13 [Escherichia coli str. K-12 substr. MG1655] | 128 | 5.0e-40
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L13 | 1 | Ribosomal protein L13 | 17-140 | 154.4 | 1.6e-45
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011076907.1| 50S ribosomal protein L13 [Mycoplasma penetrans] | 146/146 (100%) | 757 | 1.7e-101
|
| ref|WP_004024763.1| 50S ribosomal protein L13 [Mycoplasma iowae] | 94/139 (67%) | 508 | 1.7e-63
|
| ref|WP_027120138.1| 50S ribosomal protein L13 [Mycoplasma testudinis] | 87/140 (62%) | 495 | 2.1e-61
|
| ref|WP_027121988.1| 50S ribosomal protein L13 [Mycoplasma imitans] | 86/143 (60%) | 492 | 4.2e-61
|
| ref|WP_012560238.1| 50S ribosomal protein L13 [Ureaplasma urealyticum] | 88/145 (60%) | 492 | 4.7e-61
|
| ref|WP_051749464.1| 50S ribosomal protein L13 [Ureaplasma diversum] | 86/145 (59%) | 491 | 6.5e-61
|
| ref|WP_004025887.1| 50S ribosomal protein L13 [Ureaplasma urealyticum] | 88/145 (60%) | 491 | 7.2e-61
|
| ref|WP_011113535.1| 50S ribosomal protein L13 [Mycoplasma gallisepticum] | 85/143 (59%) | 488 | 2.0e-60
|
| ref|WP_151029749.1| 50S ribosomal protein L13 [Mycoplasma gallisepticum] | 85/143 (59%) | 486 | 3.2e-60
|
| ref|WP_141918144.1| 50S ribosomal protein L13 [Ureaplasma urealyticum] | 87/145 (60%) | 486 | 3.3e-60
|
Maintained by Jun Ishikawa