General features

Gene IDMYPE8070
TypeCDS
From1084726
To1084442
Strand-
General name
DefinitionYbaB/EbfC family DNA-binding protein
nt length285
aa length94
m.w.11051.81
COG[S] Function unknown

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN275 yaaK conserved hypothetical protein 325680:325982631.5e-16
mgenWP_010869347.1 YbaB/EbfC family nucleoid-associated protein [Mycoplasma genitalium]566.0e-14
mpulWP_041363888.1 YbaB/EbfC family nucleoid-associated protein [Mycoplasma pulmonis]728.3e-20
mmobWP_011264594.1 YbaB/EbfC family nucleoid-associated protein [Mycoplasma mobile]631.4e-16
mgalWP_011113859.1 YbaB/EbfC family nucleoid-associated protein [Mycoplasma gallisepticum]882.0e-26
uureWP_004026195.1 YbaB/EbfC family nucleoid-associated protein [Ureaplasma urealyticum]775.0e-22
bsubNP_387901.1 nucleoid associated protein [Bacillus subtilis subsp. subtilis str. 168]386.3e-06
caceWP_010963453.1 MULTISPECIES: YbaB/EbfC family nucleoid-associated protein [Clostridium]521.9e-11
ecoliNP_415004.1 putative nucleoid-associated protein YbaB [Escherichia coli str. K-12 substr. MG1655]371.2e-05

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

YbaB_DNA_bd1YbaB/EbfC DNA-binding family8-9164.11e-17

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077629.1| YbaB/EbfC family nucleoid-associated protein [Mycoplasma penetrans]94/94 (100%)4581.5e-57
ref|WP_004025087.1| YbaB/EbfC family nucleoid-associated protein [Mycoplasma iowae]54/93 (58%)2854.5e-31
ref|WP_033159910.1| YbaB/EbfC family nucleoid-associated protein [Mycoplasma alvi]52/93 (55%)2402.7e-24
ref|WP_027121793.1| YbaB/EbfC family nucleoid-associated protein [Mycoplasma imitans]44/93 (47%)2318.0e-23
ref|WP_065165051.1| YbaB/EbfC family nucleoid-associated protein [Mycoplasma gallisepticum...41/93 (44%)2249.8e-22
ref|WP_014886216.1| YbaB/EbfC family nucleoid-associated protein [Mycoplasma gallisepticum...41/93 (44%)2241.0e-21
ref|WP_011113859.1| YbaB/EbfC family nucleoid-associated protein [Mycoplasma gallisepticum...40/93 (43%)2194.4e-21
ref|WP_014574748.1| YbaB/EbfC family nucleoid-associated protein [Mycoplasma gallisepticum...40/93 (43%)2194.5e-21
ref|WP_027123811.1| YbaB/EbfC family nucleoid-associated protein [Mycoplasma pirum]50/93 (53%)2187.3e-21
ref|WP_004026195.1| YbaB/EbfC family nucleoid-associated protein [Ureaplasma urealyticum]37/93 (39%)1901.2e-16

Maintained by Jun Ishikawa