General features

Gene IDMYPE8020
TypeCDS
From1079212
To1078466
Strand-
General name
Definitiontranscriptional regulator
nt length747
aa length248
m.w.28038.47
COG[S] Function unknown

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN478 spore coat protein-like protein 582778:5820712048.4e-68
mgenWP_009885985.1 YebC/PmpR family DNA-binding transcriptional regulator [Mycoplasma genitalium]2078.3e-69
mpulWP_010925425.1 YebC/PmpR family DNA-binding transcriptional regulator [Mycoplasma pulmonis]1121.1e-31
mmobWP_011264711.1 YebC/PmpR family DNA-binding transcriptional regulator [Mycoplasma mobile]981.8e-26
mgalWP_011113362.1 YebC/PmpR family DNA-binding transcriptional regulator [Mycoplasma gallisepticum]2359.4e-80
uureWP_004025952.1 YebC/PmpR family DNA-binding transcriptional regulator [Ureaplasma urealyticum]2587.6e-89
bsubNP_390660.1 putative factor regulating gene expression [Bacillus subtilis subsp. subtilis str. 168]1232.3e-35
caceWP_010965592.1 MULTISPECIES: YebC/PmpR family DNA-binding transcriptional regulator [Clostridium]1131.6e-31
ecoliNP_416378.1 putative transcriptional regulator YebC [Escherichia coli str. K-12 substr. MG1655]1353.9e-40

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Transcrip_reg1Transcriptional regulator11-243191.91.2e-56

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077624.1| YebC/PmpR family DNA-binding transcriptional regulator [Mycoplasma pen...248/248 (100%)12884.0e-179
ref|WP_004025330.1| YebC/PmpR family DNA-binding transcriptional regulator [Mycoplasma iow...161/246 (65%)8213.8e-108
ref|WP_036451325.1| YebC/PmpR family DNA-binding transcriptional regulator [Mycoplasma iow...160/246 (65%)8137.8e-107
ref|WP_004025952.1| YebC/PmpR family DNA-binding transcriptional regulator [Ureaplasma ure...131/245 (53%)6591.8e-83
ref|WP_004026686.1| YebC/PmpR family DNA-binding transcriptional regulator [Ureaplasma ure...130/245 (53%)6557.9e-83
ref|WP_004026484.1| YebC/PmpR family DNA-binding transcriptional regulator [Ureaplasma ure...130/245 (53%)6557.9e-83
ref|WP_016828930.1| YebC/PmpR family DNA-binding transcriptional regulator [Ureaplasma ure...130/245 (53%)6558.3e-83
ref|WP_027124114.1| YebC/PmpR family DNA-binding transcriptional regulator [Mycoplasma pir...130/244 (53%)6349.2e-80
ref|WP_033160067.1| YebC/PmpR family DNA-binding transcriptional regulator [Mycoplasma alv...127/242 (52%)6322.2e-79
ref|WP_006688835.1| YebC/PmpR family DNA-binding transcriptional regulator [Ureaplasma par...126/245 (51%)6312.9e-79

Maintained by Jun Ishikawa