General features
| Gene ID | MYPE8010
|
| Type | CDS
|
| From | 1078464
|
| To | 1077052
|
| Strand | -
|
| General name | proS
|
| Definition | prolyl aminoacyl-tRNA synthetase
|
| nt length | 1413
|
| aa length | 470
|
| m.w. | 54838.26
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN402 proS putative prolyl-tRNA synthetase 483529:484980 | 347 | 5.0e-117
|
| mgen | WP_009885995.1 proline--tRNA ligase [Mycoplasma genitalium] | 344 | 7.3e-116
|
| mpul | WP_041363954.1 proline--tRNA ligase [Mycoplasma pulmonis] | 390 | 4.5e-134
|
| mmob | WP_041363046.1 proline--tRNA ligase [Mycoplasma mobile] | 393 | 5.3e-135
|
| mmyc | NP_975325.1 prolyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 396 | 4.9e-136
|
| mgal | WP_011113463.1 proline--tRNA ligase [Mycoplasma gallisepticum] | 365 | 3.2e-124
|
| uure | WP_004026194.1 proline--tRNA ligase [Ureaplasma urealyticum] | 434 | 3.2e-151
|
| phyt | WP_011160621.1 proline--tRNA ligase [Onion yellows phytoplasma] | 356 | 7.1e-121
|
| bsub | NP_389539.1 prolyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] | 59 | 2.2e-10
|
| cace | WP_010966455.1 MULTISPECIES: proline--tRNA ligase [Clostridium] | 58 | 5.2e-10
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| ProRS-C_1 | 1 | Prolyl-tRNA synthetase, C-terminal | 404-470 | 71.0 | 6.9e-20
|
| tRNA-synt_2b | 1 | tRNA synthetase class II core domain (G, H, P, S and T) | 97-268 | 65.2 | 7.2e-18
|
| HGTP_anticodon | 1 | Anticodon binding domain | 289-375 | 46.7 | 2.6e-12
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077623.1| proline--tRNA ligase [Mycoplasma penetrans] | 470/470 (100%) | 2487 | 0.0e+00
|
| ref|WP_004025329.1| proline--tRNA ligase [Mycoplasma iowae] | 271/470 (57%) | 1476 | 0.0e+00
|
| ref|WP_036451324.1| proline--tRNA ligase [Mycoplasma iowae] | 270/470 (57%) | 1474 | 0.0e+00
|
| ref|WP_031488980.1| proline--tRNA ligase [Ureaplasma canigenitalium] | 226/470 (48%) | 1149 | 9.9e-151
|
| ref|WP_027875574.1| proline--tRNA ligase [Mesoplasma chauliocola] | 221/470 (47%) | 1128 | 1.2e-147
|
| ref|WP_045470485.1| proline--tRNA ligase [Ureaplasma parvum] | 227/470 (48%) | 1123 | 6.8e-147
|
| ref|WP_097351565.1| proline--tRNA ligase [Mesoplasma florum] | 219/470 (46%) | 1123 | 6.8e-147
|
| ref|WP_004026654.1| proline--tRNA ligase [Ureaplasma urealyticum] | 225/470 (47%) | 1122 | 1.2e-146
|
| ref|WP_011183374.1| proline--tRNA ligase [Mesoplasma florum] | 218/470 (46%) | 1121 | 1.5e-146
|
| ref|WP_106387706.1| proline--tRNA ligase [Mesoplasma florum] | 218/470 (46%) | 1121 | 1.8e-146
|
Maintained by Jun Ishikawa