General features

Gene IDMYPE730
TypeCDS
From80780
To82618
Strand+
General name
Definitiondeoxyxylulose-5-phosphate synthase
nt length1839
aa length612
m.w.69550.73
COG[G] Carbohydrate transport and metabolism

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mgalWP_011113599.1 1-deoxy-D-xylulose-5-phosphate synthase [Mycoplasma gallisepticum]3824.2e-127
bsubNP_390307.1 1-deoxyxylulose-5-phosphate synthase [Bacillus subtilis subsp. subtilis str. 168]3067.5e-97
caceWP_010965377.1 MULTISPECIES: 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium]3428.7e-111
ecoliNP_414954.1 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli str. K-12 substr. MG1655]3378.7e-109

*mgal, Mycoplasma gallisepticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

DXP_synthase_N11-deoxy-D-xylulose-5-phosphate synthase9-282298.73.2e-89

Transket_pyr1Transketolase, pyrimidine binding domain315-47581.27.1e-23

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011076899.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mycoplasma penetrans]612/612 (100%)31860.0e+00
ref|WP_036451384.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mycoplasma iowae]302/600 (50%)14640.0e+00
ref|WP_004025320.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mycoplasma iowae]302/600 (50%)14560.0e+00
ref|WP_052663395.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mycoplasma testudinis]251/566 (44%)11434.5e-145
ref|WP_036448658.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mycoplasma pirum]267/603 (44%)10599.7e-133
ref|WP_074686359.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kandleria vitulina]238/606 (39%)10455.3e-131
ref|WP_029070793.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kandleria vitulina]237/606 (39%)10431.0e-130
ref|WP_031588602.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kandleria vitulina]237/606 (39%)10431.1e-130
ref|WP_029073108.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kandleria vitulina]237/606 (39%)10431.1e-130
ref|WP_033159783.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mycoplasma alvi]256/600 (42%)10321.2e-128

Maintained by Jun Ishikawa