General features
| Gene ID | MPN682
|
| Type | CDS
|
| From | 805848
|
| To | 805702
|
| Strand | -
|
| General name | rpmH
|
| Definition | ribosomal protein L34
|
| nt length | 147
|
| aa length | 48
|
| m.w. | 5599.66
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10420 rpmH ribosomal protein L34 1358463:1358320 | 60 | 1.6e-16
|
| mgen | WP_009885567.1 50S ribosomal protein L34 [Mycoplasma genitalium] | 82 | 1.7e-25
|
| mpul | WP_010924958.1 50S ribosomal protein L34 [Mycoplasma pulmonis] | 58 | 1.0e-15
|
| mmob | WP_011265152.1 50S ribosomal protein L34 [Mycoplasma mobile] | 66 | 5.3e-19
|
| mmyc | NP_976027.3 50S ribosomal protein L34 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 59 | 6.9e-16
|
| mgal | WP_011113236.1 50S ribosomal protein L34 [Mycoplasma gallisepticum] | 67 | 3.6e-19
|
| uure | WP_004026213.1 50S ribosomal protein L34 [Ureaplasma urealyticum] | 57 | 1.8e-15
|
| phyt | WP_011160622.1 MULTISPECIES: 50S ribosomal protein L34 [Candidatus Phytoplasma asteris] | 61 | 3.8e-17
|
| bsub | NP_391986.1 ribosomal protein L34 [Bacillus subtilis subsp. subtilis str. 168] | 47 | 1.1e-10
|
| cace | WP_010966999.1 MULTISPECIES: 50S ribosomal protein L34 [Clostridium] | 38 | 4.9e-07
|
| ecoli | NP_418158.1 50S ribosomal subunit protein L34 [Escherichia coli str. K-12 substr. MG1655] | 52 | 1.3e-12
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L34 | 1 | Ribosomal protein L34 | 1-44 | 81.1 | 4.1e-23
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010875039.1| 50S ribosomal protein L34 [Mycoplasma pneumoniae] | 48/48 (100%) | 232 | 2.4e-24
|
| ref|WP_009885567.1| 50S ribosomal protein L34 [Mycoplasma genitalium] | 42/48 (87%) | 203 | 5.8e-20
|
| ref|WP_002620350.1| MULTISPECIES: 50S ribosomal protein L34 [Leptospira] | 36/48 (75%) | 174 | 1.6e-15
|
| ref|WP_027119772.1| 50S ribosomal protein L34 [Mycoplasma testudinis] | 35/47 (74%) | 171 | 3.7e-15
|
| ref|WP_061223346.1| 50S ribosomal protein L34 [Leptospira weilii] | 35/48 (72%) | 171 | 4.0e-15
|
| ref|WP_104427604.1| 50S ribosomal protein L34 [Methylobacter tundripaludum] | 35/44 (79%) | 171 | 4.4e-15
|
| ref|WP_002724440.1| MULTISPECIES: 50S ribosomal protein L34 [Leptospira] | 35/48 (72%) | 171 | 4.5e-15
|
| ref|WP_020769764.1| MULTISPECIES: 50S ribosomal protein L34 [Leptospira] | 35/48 (72%) | 171 | 4.9e-15
|
| ref|WP_151313575.1| 50S ribosomal protein L34 [Leptospira interrogans] | 35/48 (72%) | 170 | 5.4e-15
|
| ref|WP_000828326.1| MULTISPECIES: 50S ribosomal protein L34 [Leptospira] | 35/48 (72%) | 170 | 5.8e-15
|
Maintained by Jun Ishikawa