General features
| Gene ID | MPN681
|
| Type | CDS
|
| From | 805712
|
| To | 805356
|
| Strand | -
|
| General name | rnpA
|
| Definition | RNaseP C5 chain
|
| nt length | 357
|
| aa length | 118
|
| m.w. | 13970.53
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10410 rnpA ribonuclease P protein component 1358308:1357973 | 62 | 2.5e-15
|
| mgen | WP_009885568.1 ribonuclease P protein component [Mycoplasma genitalium] | 140 | 2.7e-46
|
| mpul | WP_010924957.1 ribonuclease P protein component [Mycoplasma pulmonis] | 50 | 1.2e-10
|
| mmob | WP_011265151.1 ribonuclease P protein component [Mycoplasma mobile] | 43 | 4.1e-08
|
| mmyc | NP_976026.1 ribonuclease P [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 33 | 3.1e-04
|
| mgal | WP_011113237.1 ribonuclease P protein component [Mycoplasma gallisepticum] | 36 | 1.2e-05
|
| uure | WP_004025778.1 ribonuclease P protein component [Ureaplasma urealyticum] | 49 | 2.5e-10
|
| phyt | WP_041624709.1 ribonuclease P protein component [Onion yellows phytoplasma] | 42 | 5.7e-08
|
| cace | WP_010964735.1 MULTISPECIES: PucR family transcriptional regulator [Clostridium] | 26 | 6.2e-01
|
| ecoli | NP_418159.1 RNase P protein component [Escherichia coli str. K-12 substr. MG1655] | 27 | 1.1e-01
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribonuclease_P | 1 | Ribonuclease P | 5-109 | 67.8 | 7.9e-19
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010875038.1| ribonuclease P protein component [Mycoplasma pneumoniae] | 117/118 (99%) | 611 | 3.9e-80
|
| ref|WP_009885568.1| ribonuclease P protein component [Mycoplasma genitalium] | 65/114 (57%) | 353 | 9.0e-41
|
| ref|WP_156940243.1| ribonuclease P protein component [Mycoplasma alvi] | 37/105 (35%) | 175 | 6.6e-14
|
| ref|WP_081463006.1| ribonuclease P protein component [Mycoplasma iowae] | 41/108 (37%) | 171 | 3.4e-13
|
| ref|WP_004024633.1| ribonuclease P protein component [Mycoplasma iowae] | 39/103 (37%) | 160 | 1.3e-11
|
| ref|WP_011077854.1| ribonuclease P protein component [Mycoplasma penetrans] | 34/102 (33%) | 150 | 3.8e-10
|
| ref|WP_052270433.1| ribonuclease P protein component [Mycoplasma penetrans] | 34/102 (33%) | 150 | 4.0e-10
|
| ref|WP_052663032.1| ribonuclease P protein component [Mycoplasma pirum] | 35/108 (32%) | 150 | 4.3e-10
|
| ref|WP_104697691.1| MULTISPECIES: ribonuclease P protein component [unclassified Helicobac... | 28/95 (29%) | 130 | 4.5e-07
|
| ref|WP_027119773.1| ribonuclease P protein component [Mycoplasma testudinis] | 32/103 (31%) | 130 | 4.7e-07
|
Maintained by Jun Ishikawa