General features

Gene IDMPN679
TypeCDS
From804225
To803434
Strand-
General nameksgA
DefinitionS-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase
nt length792
aa length263
m.w.29761.66
COG[J] Translation, ribosomal structure and biogenesis

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE10390 ksgA ribosomal RNA adenine dimethylase 1356795:13559771353.9e-40
mgenWP_010869490.1 ribosomal RNA small subunit methyltransferase A [Mycoplasma genitalium]3271.3e-115
mpulWP_010924819.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Mycoplasma pulmonis]1092.2e-30
mmobWP_011265084.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Mycoplasma mobile]1113.3e-31
mmycNP_975015.1 dimethyladenosine transferase [Mycoplasma mycoides subsp. mycoides SC str. PG1]801.3e-19
mgalWP_011113239.1 ribosomal RNA small subunit methyltransferase A [Mycoplasma gallisepticum]1961.3e-63
uureWP_004025835.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Ureaplasma urealyticum]1151.4e-32
phytWP_011161073.1 MULTISPECIES: ribosomal RNA small subunit methyltransferase A [Candidatus Phytoplasma asteris]1091.5e-30
bsubNP_387923.1 dimethyladenosine 16S ribosomal RNA transferase [Bacillus subtilis subsp. subtilis str. 168]1021.3e-26
caceWP_010966268.1 MULTISPECIES: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Clostridium]1061.8e-28
ecoliNP_414593.1 16S rRNA m(6)2A1518,m(6)2A1519 dimethyltransferase [Escherichia coli str. K-12 substr. MG1655]922.7e-23

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

RrnaAD1Ribosomal RNA adenine dimethylase8-253135.61.6e-39

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010875036.1| ribosomal RNA small subunit methyltransferase A [Mycoplasma pneumoniae...262/263 (99%)13710.0e+00
ref|WP_053344090.1| ribosomal RNA small subunit methyltransferase A [Mycoplasma pneumoniae...261/263 (99%)13670.0e+00
ref|WP_010869490.1| ribosomal RNA small subunit methyltransferase A [Mycoplasma genitalium...156/263 (59%)8384.3e-110
ref|WP_027122281.1| ribosomal RNA small subunit methyltransferase A [Mycoplasma imitans]106/253 (41%)5086.4e-60
ref|WP_011883616.1| ribosomal RNA small subunit methyltransferase A [Mycoplasma gallisepti...106/253 (41%)5032.8e-59
ref|WP_011113239.1| ribosomal RNA small subunit methyltransferase A [Mycoplasma gallisepti...105/253 (41%)4972.9e-58
ref|WP_151059527.1| ribosomal RNA small subunit methyltransferase A [Mycoplasma gallisepti...105/253 (41%)4964.1e-58
ref|WP_065165539.1| ribosomal RNA small subunit methyltransferase A [Mycoplasma gallisepti...105/253 (41%)4938.6e-58
ref|WP_052664005.1| ribosomal RNA small subunit methyltransferase A [Mycoplasma alvi]106/246 (43%)4921.7e-57
ref|WP_014574356.1| ribosomal RNA small subunit methyltransferase A [Mycoplasma gallisepti...105/253 (41%)4903.0e-57

Maintained by Jun Ishikawa