General features
| Gene ID | MPN656
|
| Type | CDS
|
| From | 781910
|
| To | 781095
|
| Strand | -
|
| General name |
|
| Definition | GTP-binding protein
|
| nt length | 816
|
| aa length | 271
|
| m.w. | 30513.50
|
| COG | [R] General function prediction only
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE530 predicted GTPase, containing MMR_HSR1 domain 64475:65299 | 152 | 1.8e-46
|
| mgen | WP_010869482.1 ribosome biogenesis GTPase YlqF [Mycoplasma genitalium] | 383 | 1.9e-137
|
| mpul | WP_041364367.1 ribosome biogenesis GTPase YlqF [Mycoplasma pulmonis] | 126 | 1.7e-36
|
| mmob | WP_011264639.1 ribosome biogenesis GTPase YlqF [Mycoplasma mobile] | 114 | 7.3e-32
|
| mmyc | NP_975415.1 GTP-binding protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 103 | 1.8e-27
|
| mgal | WP_011113881.1 ribosome biogenesis GTPase YlqF [Mycoplasma gallisepticum] | 201 | 2.3e-65
|
| uure | WP_004025730.1 ribosome biogenesis GTPase YlqF [Ureaplasma urealyticum] | 169 | 4.9e-53
|
| phyt | WP_011160652.1 ribosome biogenesis GTPase YlqF [Onion yellows phytoplasma] | 130 | 2.7e-38
|
| bsub | NP_389487.1 ribosome biogenesis GTPase A [Bacillus subtilis subsp. subtilis str. 168] | 160 | 9.2e-49
|
| cace | WP_010965068.1 ribosome biogenesis GTPase YlqF [Clostridium acetobutylicum] | 146 | 1.2e-43
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| MMR_HSR1 | 1 | 50S ribosome-binding GTPase | 120-176 | 58.9 | 4.7e-16
|
| FeoB_N | 1 | Ferrous iron transport protein B | 119-173 | 35.7 | 5.5e-09
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010875013.1| ribosome biogenesis GTPase YlqF [Mycoplasma pneumoniae] | 271/271 (100%) | 1431 | 0.0e+00
|
| ref|WP_038534321.1| ribosome biogenesis GTPase YlqF [Mycoplasma pneumoniae] | 270/271 (99%) | 1430 | 0.0e+00
|
| ref|WP_159241560.1| ribosome biogenesis GTPase YlqF [Mycoplasma pneumoniae] | 270/271 (99%) | 1424 | 0.0e+00
|
| ref|WP_014325664.1| ribosome biogenesis GTPase YlqF [Mycoplasma pneumoniae] | 270/271 (99%) | 1424 | 0.0e+00
|
| ref|WP_041360991.1| ribosome biogenesis GTPase YlqF [Mycoplasma genitalium] | 194/271 (71%) | 989 | 1.1e-132
|
| ref|WP_081494753.1| ribosome biogenesis GTPase YlqF [Mycoplasma genitalium] | 193/271 (71%) | 984 | 6.0e-132
|
| ref|WP_010869482.1| ribosome biogenesis GTPase YlqF [Mycoplasma genitalium] | 193/271 (71%) | 983 | 6.4e-132
|
| ref|WP_081495261.1| ribosome biogenesis GTPase YlqF [Mycoplasma genitalium] | 192/271 (70%) | 983 | 6.7e-132
|
| ref|WP_027120182.1| ribosome biogenesis GTPase YlqF [Mycoplasma testudinis] | 129/266 (48%) | 594 | 8.9e-73
|
| ref|WP_065165087.1| ribosome biogenesis GTPase YlqF [Mycoplasma gallisepticum] | 112/261 (42%) | 521 | 9.8e-62
|
Maintained by Jun Ishikawa