General features
| Gene ID | MYPE6390
|
| Type | CDS
|
| From | 818034
|
| To | 817045
|
| Strand | -
|
| General name | recA
|
| Definition | recombination protein RecA
|
| nt length | 990
|
| aa length | 329
|
| m.w. | 36753.91
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN490 recA recombination protein RecA 597826:596816 | 303 | 4.1e-104
|
| mgen | WP_009885970.1 recombinase RecA [Mycoplasma genitalium] | 306 | 3.1e-105
|
| mpul | WP_010925056.1 recombinase RecA [Mycoplasma pulmonis] | 324 | 5.3e-112
|
| mmob | WP_011265035.1 recombinase RecA [Mycoplasma mobile] | 323 | 8.7e-112
|
| mmyc | NP_975407.1 recombinase A [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 328 | 2.3e-113
|
| mgal | WP_011113721.1 recombinase RecA [Mycoplasma gallisepticum] | 353 | 1.6e-123
|
| uure | WP_004027094.1 recombinase RecA [Ureaplasma urealyticum] | 344 | 6.0e-120
|
| phyt | WP_041624616.1 hypothetical protein [Onion yellows phytoplasma] | 28 | 1.3e-02
|
| bsub | NP_389576.2 multifunctional SOS repair factor [Bacillus subtilis subsp. subtilis str. 168] | 345 | 9.6e-120
|
| cace | WP_010965121.1 MULTISPECIES: recombinase RecA [Clostridium] | 301 | 4.5e-102
|
| ecoli | NP_417179.1 DNA recombination/repair protein RecA [Escherichia coli str. K-12 substr. MG1655] | 303 | 7.0e-103
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| RecA | 1 | recA bacterial DNA recombination protein | 8-265 | 348.0 | 3.4e-104
|
| Rad51 | 1 | Rad51 | 37-225 | 46.0 | 3.9e-12
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077459.1| recombinase RecA [Mycoplasma penetrans] | 329/329 (100%) | 1724 | 0.0e+00
|
| ref|WP_004024930.1| recombinase RecA [Mycoplasma iowae] | 202/318 (63%) | 1104 | 2.1e-148
|
| ref|WP_156933125.1| recombinase RecA [Mycoplasma testudinis] | 176/318 (55%) | 965 | 3.8e-127
|
| ref|WP_125565525.1| recombinase RecA [Lactobacillus insicii] | 174/323 (53%) | 942 | 4.7e-123
|
| ref|WP_025023232.1| recombinase RecA [Lactobacillus nodensis] | 173/316 (54%) | 940 | 8.9e-123
|
| ref|WP_054736191.1| recombinase RecA [Lactobacillus similis] | 172/314 (54%) | 935 | 2.5e-122
|
| ref|WP_125587722.1| recombinase RecA [Lactobacillus sp. 204-8] | 171/316 (54%) | 933 | 1.3e-121
|
| ref|WP_057866933.1| recombinase RecA [Lactobacillus crustorum] | 172/314 (54%) | 930 | 2.1e-121
|
| ref|WP_102195248.1| recombinase RecA [Lactobacillus nuruki] | 173/316 (54%) | 930 | 2.5e-121
|
| ref|WP_056945963.1| MULTISPECIES: recombinase RecA [Lactobacillus] | 177/324 (54%) | 929 | 2.6e-121
|
Maintained by Jun Ishikawa