General features
| Gene ID | MPN636
|
| Type | CDS
|
| From | 762639
|
| To | 763193
|
| Strand | +
|
| General name | frr
|
| Definition | ribosome releasing factor
|
| nt length | 555
|
| aa length | 184
|
| m.w. | 21666.89
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE9560 frr ribosome releasing/ recycling factor 1279098:1278547 | 132 | 4.4e-41
|
| mgen | WP_010869481.1 ribosome recycling factor [Mycoplasma genitalium] | 277 | 1.8e-98
|
| mpul | WP_010925023.1 ribosome recycling factor [Mycoplasma pulmonis] | 98 | 1.2e-27
|
| mmob | WP_011264575.1 ribosome recycling factor [Mycoplasma mobile] | 103 | 6.2e-30
|
| mmyc | NP_975581.1 ribosome recycling factor [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 103 | 1.4e-29
|
| mgal | WP_011113319.1 ribosome recycling factor [Mycoplasma gallisepticum] | 165 | 5.1e-54
|
| uure | WP_012560274.1 ribosome recycling factor [Ureaplasma urealyticum] | 114 | 6.2e-34
|
| phyt | WP_011160543.1 MULTISPECIES: ribosome-recycling factor [Candidatus Phytoplasma asteris] | 73 | 1.2e-18
|
| bsub | NP_389534.1 ribosome recycling factor [Bacillus subtilis subsp. subtilis str. 168] | 115 | 1.1e-33
|
| cace | WP_010965096.1 MULTISPECIES: ribosome recycling factor [Clostridium] | 97 | 7.5e-27
|
| ecoli | NP_414714.1 ribosome-recycling factor [Escherichia coli str. K-12 substr. MG1655] | 95 | 6.1e-26
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| RRF | 1 | Ribosome recycling factor | 21-182 | 155.7 | 9.7e-46
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874993.1| ribosome recycling factor [Mycoplasma pneumoniae] | 184/184 (100%) | 951 | 9.4e-130
|
| ref|WP_014325650.1| ribosome recycling factor [Mycoplasma pneumoniae] | 183/184 (99%) | 949 | 1.9e-129
|
| ref|WP_010869481.1| ribosome recycling factor [Mycoplasma genitalium] | 130/184 (70%) | 709 | 5.9e-93
|
| ref|WP_014894515.1| ribosome recycling factor [Mycoplasma genitalium] | 129/184 (70%) | 702 | 7.7e-92
|
| ref|WP_027119879.1| ribosome recycling factor [Mycoplasma testudinis] | 86/184 (46%) | 443 | 1.5e-52
|
| ref|WP_052663868.1| ribosome recycling factor [Mycoplasma alvi] | 89/184 (48%) | 435 | 2.5e-51
|
| ref|WP_027123876.1| ribosome recycling factor [Mycoplasma pirum] | 86/184 (46%) | 432 | 7.9e-51
|
| ref|WP_014885827.1| ribosome recycling factor [Mycoplasma gallisepticum] | 78/182 (42%) | 418 | 1.0e-48
|
| ref|WP_011113319.1| ribosome recycling factor [Mycoplasma gallisepticum] | 78/182 (42%) | 418 | 1.1e-48
|
| ref|WP_065165665.1| ribosome recycling factor [Mycoplasma gallisepticum] | 78/182 (42%) | 416 | 1.9e-48
|
Maintained by Jun Ishikawa