General features
| Gene ID | MPN617
|
| Type | CDS
|
| From | 740268
|
| To | 739828
|
| Strand | -
|
| General name | rplM
|
| Definition | ribosomal protein L13
|
| nt length | 441
|
| aa length | 146
|
| m.w. | 16791.36
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE810 rplM ribosomal protein L13 96331:96771 | 181 | 2.6e-61
|
| mgen | WP_010869476.1 50S ribosomal protein L13 [Mycoplasma genitalium] | 267 | 1.4e-95
|
| mpul | WP_010925296.1 50S ribosomal protein L13 [Mycoplasma pulmonis] | 135 | 3.0e-43
|
| mmob | WP_011264749.1 50S ribosomal protein L13 [Mycoplasma mobile] | 134 | 4.4e-43
|
| mmyc | NP_975690.1 50S ribosomal protein L13 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 126 | 1.4e-39
|
| mgal | WP_011113535.1 50S ribosomal protein L13 [Mycoplasma gallisepticum] | 196 | 3.7e-67
|
| uure | WP_012560238.1 50S ribosomal protein L13 [Ureaplasma urealyticum] | 189 | 1.2e-64
|
| phyt | WP_011160513.1 MULTISPECIES: 50S ribosomal protein L13 [Candidatus Phytoplasma asteris] | 113 | 1.0e-34
|
| bsub | NP_388030.2 ribosomal protein L13 [Bacillus subtilis subsp. subtilis str. 168] | 122 | 1.6e-37
|
| cace | WP_010966379.1 MULTISPECIES: 50S ribosomal protein L13 [Clostridium] | 138 | 1.0e-43
|
| ecoli | NP_417698.1 50S ribosomal subunit protein L13 [Escherichia coli str. K-12 substr. MG1655] | 137 | 1.6e-43
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L13 | 1 | Ribosomal protein L13 | 17-140 | 156.7 | 3e-46
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874974.1| 50S ribosomal protein L13 [Mycoplasma pneumoniae] | 146/146 (100%) | 777 | 1.7e-104
|
| ref|WP_058141151.1| 50S ribosomal protein L13 [Mycoplasma pneumoniae] | 145/146 (99%) | 776 | 2.7e-104
|
| ref|WP_014575035.1| 50S ribosomal protein L13 [Mycoplasma pneumoniae] | 141/141 (100%) | 750 | 1.6e-100
|
| ref|WP_010869476.1| 50S ribosomal protein L13 [Mycoplasma genitalium] | 126/146 (86%) | 682 | 4.6e-90
|
| ref|WP_027123828.1| 50S ribosomal protein L13 [Mycoplasma pirum] | 102/145 (70%) | 558 | 3.3e-71
|
| ref|WP_052663877.1| 50S ribosomal protein L13 [Mycoplasma alvi] | 100/145 (68%) | 543 | 8.0e-69
|
| ref|WP_027120138.1| 50S ribosomal protein L13 [Mycoplasma testudinis] | 93/146 (63%) | 510 | 1.0e-63
|
| ref|WP_011113535.1| 50S ribosomal protein L13 [Mycoplasma gallisepticum] | 91/146 (62%) | 497 | 8.0e-62
|
| ref|WP_151029749.1| 50S ribosomal protein L13 [Mycoplasma gallisepticum] | 91/146 (62%) | 496 | 1.3e-61
|
| ref|WP_027121988.1| 50S ribosomal protein L13 [Mycoplasma imitans] | 91/146 (62%) | 494 | 2.3e-61
|
Maintained by Jun Ishikawa