General features
| Gene ID | MYPE6120
|
| Type | CDS
|
| From | 781997
|
| To | 783691
|
| Strand | +
|
| General name | argS
|
| Definition | arginyl tRNA synthetase
|
| nt length | 1695
|
| aa length | 564
|
| m.w. | 65015.44
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN556 argS arginyl-tRNA synthetase 677304:675691 | 242 | 1.4e-74
|
| mgen | WP_009885941.1 arginine--tRNA ligase [Mycoplasma genitalium] | 243 | 4.8e-75
|
| mpul | WP_010925047.1 arginine--tRNA ligase [Mycoplasma pulmonis] | 303 | 5.4e-98
|
| mmob | WP_011264644.1 arginine--tRNA ligase [Mycoplasma mobile] | 380 | 1.1e-127
|
| mmyc | NP_975580.1 arginyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 353 | 4.9e-117
|
| mgal | WP_011113241.1 arginine--tRNA ligase [Mycoplasma gallisepticum] | 360 | 5.6e-120
|
| uure | WP_004025854.1 arginine--tRNA ligase [Ureaplasma urealyticum] | 438 | 2.1e-150
|
| phyt | WP_011160806.1 arginine--tRNA ligase [Onion yellows phytoplasma] | 50 | 2.6e-08
|
| bsub | NP_391614.1 arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] | 387 | 1.6e-129
|
| cace | WP_010964359.1 MULTISPECIES: arginine--tRNA ligase [Clostridium] | 95 | 1.6e-21
|
| ecoli | NP_416390.1 arginine--tRNA ligase [Escherichia coli str. K-12 substr. MG1655] | 114 | 1.5e-27
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| DALR_1 | 1 | DALR anticodon binding domain | 445-559 | 99.3 | 1.6e-28
|
| Arg_tRNA_synt_N | 1 | Arginyl tRNA synthetase N terminal domain | 9-94 | 79.5 | 2.1e-22
|
| tRNA-synt_1d | 1 | tRNA synthetases class I (R) | 114-407 | 70.7 | 1e-19
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077434.1| arginine--tRNA ligase [Mycoplasma penetrans] | 564/564 (100%) | 2972 | 0.0e+00
|
| ref|WP_129374468.1| arginine--tRNA ligase [Mycoplasma penetrans] | 563/564 (99%) | 2969 | 0.0e+00
|
| ref|WP_004024651.1| arginine--tRNA ligase [Mycoplasma iowae] | 342/560 (61%) | 1732 | 0.0e+00
|
| ref|WP_036452301.1| arginine--tRNA ligase [Mycoplasma iowae] | 342/560 (61%) | 1728 | 0.0e+00
|
| ref|WP_038101869.1| arginine--tRNA ligase [Ureaplasma diversum] | 248/553 (44%) | 1172 | 1.0e-151
|
| ref|WP_006688892.1| arginine--tRNA ligase [Ureaplasma parvum] | 233/526 (44%) | 1136 | 2.7e-146
|
| ref|WP_114119899.1| arginine--tRNA ligase [Ureaplasma urealyticum] | 227/526 (43%) | 1132 | 9.1e-146
|
| ref|WP_004025854.1| arginine--tRNA ligase [Ureaplasma urealyticum] | 226/526 (42%) | 1127 | 5.0e-145
|
| ref|WP_016829101.1| arginine--tRNA ligase [Ureaplasma urealyticum] | 225/526 (42%) | 1123 | 2.6e-144
|
| ref|WP_004027456.1| arginine--tRNA ligase [Ureaplasma urealyticum] | 225/526 (42%) | 1119 | 1.0e-143
|
Maintained by Jun Ishikawa