General features
| Gene ID | MYPE5880
|
| Type | CDS
|
| From | 743138
|
| To | 741504
|
| Strand | -
|
| General name |
|
| Definition | ABC transporter permease
|
| nt length | 1635
|
| aa length | 544
|
| m.w. | 61666.49
|
| COG | [R] General function prediction only
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN259 sugar (ribose/galactose) ABC transporter permease subunit, but probably C-terminal 309731:311284 | 313 | 2.0e-102
|
| mgen | WP_009885676.1 ABC transporter permease [Mycoplasma genitalium] | 306 | 3.8e-100
|
| mpul | WP_010925419.1 ABC transporter permease [Mycoplasma pulmonis] | 139 | 6.9e-37
|
| mmob | WP_011264558.1 ABC transporter permease [Mycoplasma mobile] | 132 | 5.5e-35
|
| mmyc | NP_975020.1 ribose/galactose ABC transporter permease [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 147 | 4.2e-39
|
| mgal | WP_011113845.1 ABC transporter permease [Mycoplasma gallisepticum] | 341 | 9.6e-113
|
| uure | WP_012560185.1 sugar ABC transporter [Ureaplasma urealyticum] | 196 | 2.0e-56
|
| bsub | NP_391034.1 permease of ABC guanosine transporter [Bacillus subtilis subsp. subtilis str. 168] | 75 | 1.3e-15
|
| cace | WP_010964023.1 MULTISPECIES: ABC transporter permease [Clostridium] | 79 | 4.9e-17
|
| ecoli | NP_417041.1 putative ABC transporter membrane subunit YphD [Escherichia coli str. K-12 substr. MG1655] | 33 | 4.4e-02
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| BPD_transp_2 | 1 | Branched-chain amino acid transport system / permease component | 73-355 | 137.2 | 5.6e-40
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077410.1| ABC transporter permease [Mycoplasma penetrans] | 544/544 (100%) | 2848 | 0.0e+00
|
| ref|WP_052663106.1| ABC transporter permease [Mycoplasma pirum] | 268/526 (50%) | 1150 | 8.1e-148
|
| ref|WP_052663425.1| ABC transporter permease [Mycoplasma testudinis] | 255/529 (48%) | 1132 | 9.6e-146
|
| ref|WP_052664028.1| ABC transporter permease [Mycoplasma alvi] | 243/506 (48%) | 1041 | 2.8e-131
|
| ref|WP_027121797.1| ABC transporter permease [Mycoplasma imitans] | 232/526 (44%) | 978 | 7.6e-123
|
| ref|WP_014574343.1| ABC transporter permease [Mycoplasma gallisepticum] | 222/531 (41%) | 884 | 9.6e-109
|
| ref|WP_014574478.1| ABC transporter permease [Mycoplasma gallisepticum] | 223/520 (42%) | 882 | 1.4e-108
|
| ref|WP_151059800.1| ABC transporter permease [Mycoplasma gallisepticum] | 221/531 (41%) | 881 | 2.4e-108
|
| ref|WP_065165350.1| ABC transporter permease [Mycoplasma gallisepticum] | 217/514 (42%) | 877 | 1.1e-107
|
| ref|WP_011113845.1| ABC transporter permease [Mycoplasma gallisepticum] | 222/531 (41%) | 875 | 2.0e-107
|
Maintained by Jun Ishikawa