General features
| Gene ID | MYPE5870
|
| Type | CDS
|
| From | 741504
|
| To | 740575
|
| Strand | -
|
| General name |
|
| Definition | ABC transporter permease
|
| nt length | 930
|
| aa length | 309
|
| m.w. | 33068.56
|
| COG | [R] General function prediction only
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN260 rbsC sugar (ribose/galactose) ABC transporter permease subunit 311284:312219 | 238 | 4.8e-79
|
| mgen | WP_009885677.1 ABC transporter permease [Mycoplasma genitalium] | 249 | 1.3e-83
|
| mpul | WP_010925418.1 ABC transporter permease [Mycoplasma pulmonis] | 170 | 1.6e-52
|
| mmob | WP_011264559.1 ABC transporter permease [Mycoplasma mobile] | 169 | 4.1e-52
|
| mmyc | NP_975019.1 ribose/galactose ABC transporter permease [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 141 | 2.4e-41
|
| mgal | WP_011113844.1 ABC transporter permease [Mycoplasma gallisepticum] | 310 | 3.3e-107
|
| uure | WP_004025845.1 ABC transporter permease [Ureaplasma urealyticum] | 197 | 6.5e-63
|
| bsub | NP_391035.1 permease of ABC guanosine transporter [Bacillus subtilis subsp. subtilis str. 168] | 87 | 8.2e-21
|
| cace | WP_010964024.1 MULTISPECIES: ABC transporter permease [Clostridium] | 111 | 1.5e-29
|
| ecoli | YP_026162.2 arabinose ABC transporter membrane subunit [Escherichia coli str. K-12 substr. MG1655] | 37 | 6.4e-04
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| BPD_transp_2 | 1 | Branched-chain amino acid transport system / permease component | 11-285 | 116.6 | 1e-33
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077409.1| ABC transporter permease [Mycoplasma penetrans] | 309/309 (100%) | 1553 | 0.0e+00
|
| ref|WP_027121798.1| ABC transporter permease [Mycoplasma imitans] | 175/307 (57%) | 854 | 4.3e-111
|
| ref|WP_027124135.1| ABC transporter permease [Mycoplasma pirum] | 170/303 (56%) | 832 | 1.2e-107
|
| ref|WP_014574479.1| ABC transporter permease [Mycoplasma gallisepticum] | 170/307 (55%) | 827 | 7.2e-107
|
| ref|WP_027119628.1| ABC transporter permease [Mycoplasma testudinis] | 175/306 (57%) | 815 | 5.0e-105
|
| ref|WP_033160080.1| ABC transporter permease [Mycoplasma alvi] | 172/306 (56%) | 799 | 1.1e-102
|
| ref|WP_011113844.1| ABC transporter permease [Mycoplasma gallisepticum] | 173/307 (56%) | 794 | 7.0e-102
|
| ref|WP_027333242.1| ABC transporter permease [Mycoplasma gallisepticum] | 173/307 (56%) | 792 | 1.1e-101
|
| ref|WP_014886200.1| ABC transporter permease [Mycoplasma gallisepticum] | 173/307 (56%) | 791 | 1.8e-101
|
| ref|WP_065165348.1| ABC transporter permease [Mycoplasma gallisepticum] | 170/307 (55%) | 788 | 5.6e-101
|
Maintained by Jun Ishikawa