General features
| Gene ID | MYPE5860
|
| Type | CDS
|
| From | 740396
|
| To | 739245
|
| Strand | -
|
| General name | thiI
|
| Definition | thiamin biosynthesis protein
|
| nt length | 1152
|
| aa length | 383
|
| m.w. | 44372.55
|
| COG | [H] Coenzyme metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN550 Thiamin biosynthesis protein 671416:670253 | 244 | 1.3e-79
|
| mgen | WP_009885937.1 tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma genitalium] | 241 | 1.7e-78
|
| mpul | WP_010925519.1 tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma pulmonis] | 223 | 2.5e-71
|
| mmob | WP_041362743.1 tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma mobile] | 232 | 1.1e-74
|
| mmyc | NP_975279.1 thiamin biosynthesis protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 259 | 6.9e-85
|
| mgal | WP_011113749.1 tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma gallisepticum] | 274 | 6.1e-91
|
| uure | WP_004025624.1 tRNA 4-thiouridine(8) synthase ThiI [Ureaplasma urealyticum] | 304 | 1.0e-102
|
| phyt | WP_011160518.1 tRNA 4-thiouridine(8) synthase ThiI [Onion yellows phytoplasma] | 215 | 7.1e-68
|
| bsub | NP_390836.2 persulfide ATP pyrophosphatase involved in tRNA modification [Bacillus subtilis subsp. subtilis str. 168] | 220 | 4.1e-69
|
| cace | WP_010966254.1 MULTISPECIES: tRNA 4-thiouridine(8) synthase ThiI [Clostridium] | 229 | 7.8e-73
|
| ecoli | NP_414957.1 tRNA uridine 4-sulfurtransferase [Escherichia coli str. K-12 substr. MG1655] | 147 | 8.2e-41
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| ThiI | 1 | Thiamine biosynthesis protein (ThiI) | 168-365 | 205.6 | 5.7e-61
|
| THUMP | 1 | THUMP domain | 51-149 | 57.1 | 2.1e-15
|
| QueC | 1 | Queuosine biosynthesis protein QueC | 173-330 | 35.3 | 8e-09
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077408.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma penetrans] | 383/383 (100%) | 2007 | 0.0e+00
|
| ref|WP_004024660.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma iowae] | 210/383 (54%) | 983 | 2.7e-128
|
| ref|WP_006688597.1| tRNA 4-thiouridine(8) synthase ThiI [Ureaplasma parvum] | 178/370 (48%) | 779 | 2.2e-97
|
| ref|WP_006689025.1| tRNA 4-thiouridine(8) synthase ThiI [Ureaplasma parvum] | 178/370 (48%) | 779 | 2.4e-97
|
| ref|WP_004025624.1| tRNA 4-thiouridine(8) synthase ThiI [Ureaplasma urealyticum] | 172/370 (46%) | 779 | 2.4e-97
|
| ref|WP_006689284.1| tRNA 4-thiouridine(8) synthase ThiI [Ureaplasma parvum] | 178/370 (48%) | 777 | 4.2e-97
|
| ref|WP_038102859.1| tRNA 4-thiouridine(8) synthase ThiI [Ureaplasma diversum] | 170/361 (47%) | 756 | 7.4e-94
|
| ref|WP_027120879.1| tRNA 4-thiouridine(8) synthase ThiI [Mycoplasma lipofaciens] | 167/382 (43%) | 750 | 3.4e-93
|
| ref|WP_047791742.1| tRNA 4-thiouridine(8) synthase ThiI [Spiroplasma eriocheiris] | 168/358 (46%) | 747 | 1.9e-92
|
| ref|WP_031489216.1| tRNA 4-thiouridine(8) synthase ThiI [Ureaplasma canigenitalium] | 167/374 (44%) | 737 | 6.4e-91
|
Maintained by Jun Ishikawa