General features
| Gene ID | MYPE5740
|
| Type | CDS
|
| From | 728477
|
| To | 727920
|
| Strand | -
|
| General name | rplJ
|
| Definition | ribosomal protein L10
|
| nt length | 558
|
| aa length | 185
|
| m.w. | 20975.43
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN538 rplJ ribosomal protein L10 659782:660267 | 96 | 2.1e-27
|
| mgen | WP_009885818.1 50S ribosomal protein L10 [Mycoplasma genitalium] | 101 | 1.8e-29
|
| mpul | WP_041364021.1 50S ribosomal protein L10 [Mycoplasma pulmonis] | 72 | 9.7e-18
|
| mmob | WP_011265053.1 50S ribosomal protein L10 [Mycoplasma mobile] | 75 | 4.6e-19
|
| mmyc | NP_975971.1 50S ribosomal protein L10 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 93 | 6.8e-26
|
| mgal | WP_011113376.1 50S ribosomal protein L10 [Mycoplasma gallisepticum] | 128 | 1.2e-39
|
| uure | WP_004025606.1 50S ribosomal protein L10 [Ureaplasma urealyticum] | 160 | 2.3e-52
|
| phyt | WP_011160632.1 50S ribosomal protein L10 [Onion yellows phytoplasma] | 82 | 5.8e-22
|
| bsub | NP_387985.2 ribosomal protein L10 (BL5) [Bacillus subtilis subsp. subtilis str. 168] | 128 | 5.5e-39
|
| cace | WP_010966423.1 MULTISPECIES: 50S ribosomal protein L10 [Clostridium] | 78 | 9.1e-20
|
| ecoli | NP_418412.1 50S ribosomal subunit protein L10 [Escherichia coli str. K-12 substr. MG1655] | 59 | 2.0e-12
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L10 | 1 | Ribosomal protein L10 | 30-121 | 70.0 | 1.5e-19
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_044891269.1| 50S ribosomal protein L10 [Mycoplasma penetrans] | 161/161 (100%) | 828 | 2.3e-111
|
| ref|WP_004025210.1| 50S ribosomal protein L10 [Mycoplasma iowae] | 110/161 (68%) | 571 | 2.7e-72
|
| ref|WP_004025606.1| 50S ribosomal protein L10 [Ureaplasma urealyticum] | 82/161 (50%) | 405 | 5.5e-47
|
| ref|WP_006688636.1| 50S ribosomal protein L10 [Ureaplasma parvum] | 79/161 (49%) | 398 | 6.3e-46
|
| ref|WP_031488857.1| 50S ribosomal protein L10 [Ureaplasma canigenitalium] | 78/153 (50%) | 397 | 8.7e-46
|
| ref|WP_038102515.1| 50S ribosomal protein L10 [Ureaplasma diversum] | 78/148 (52%) | 385 | 5.6e-44
|
| ref|WP_087357598.1| 50S ribosomal protein L10 [Massilimicrobiota timonensis] | 66/159 (41%) | 368 | 3.1e-41
|
| ref|WP_087244293.1| MULTISPECIES: 50S ribosomal protein L10 [Massilimicrobiota] | 66/160 (41%) | 367 | 3.7e-41
|
| ref|WP_072710431.1| 50S ribosomal protein L10 [Salinicoccus alkaliphilus] | 71/160 (44%) | 365 | 7.2e-41
|
| ref|WP_085504865.1| 50S ribosomal protein L10 [Thalassobacillus devorans] | 73/160 (45%) | 360 | 4.5e-40
|
Maintained by Jun Ishikawa