General features
| Gene ID | MYPE5650
|
| Type | CDS
|
| From | 719197
|
| To | 719757
|
| Strand | +
|
| General name | def
|
| Definition | polypeptide deformylase
|
| nt length | 561
|
| aa length | 186
|
| m.w. | 21540.54
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN245 def polypeptide deformylase 297788:297138 | 175 | 2.0e-57
|
| mgen | WP_009885664.1 peptide deformylase [Mycoplasma genitalium] | 191 | 3.0e-64
|
| mpul | WP_083801835.1 peptide deformylase [Mycoplasma pulmonis] | 75 | 5.9e-19
|
| mmob | WP_041362993.1 peptide deformylase [Mycoplasma mobile] | 103 | 9.8e-30
|
| mmyc | NP_975221.1 peptide deformylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 103 | 1.4e-29
|
| mgal | WP_011113901.1 peptide deformylase [Mycoplasma gallisepticum] | 178 | 7.0e-59
|
| uure | WP_012560199.1 peptide deformylase [Ureaplasma urealyticum] | 159 | 1.9e-51
|
| bsub | NP_389339.1 N-formyl-cysteine deformylase (promiscuous) [Bacillus subtilis subsp. subtilis str. 168] | 113 | 8.5e-33
|
| cace | WP_010965029.1 MULTISPECIES: peptide deformylase [Clostridium] | 57 | 7.2e-12
|
| ecoli | NP_417745.1 peptide deformylase [Escherichia coli str. K-12 substr. MG1655] | 58 | 3.1e-12
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Pep_deformylase | 1 | Polypeptide deformylase | 10-175 | 129.2 | 1e-37
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077388.1| peptide deformylase [Mycoplasma penetrans] | 186/186 (100%) | 982 | 1.7e-134
|
| ref|WP_040538211.1| peptide deformylase [Mycoplasma iowae] | 116/186 (62%) | 646 | 3.0e-83
|
| ref|WP_036452423.1| peptide deformylase [Mycoplasma iowae] | 116/186 (62%) | 645 | 5.1e-83
|
| ref|WP_009885664.1| peptide deformylase [Mycoplasma genitalium] | 90/182 (49%) | 485 | 1.0e-58
|
| ref|WP_052663486.1| peptide deformylase [Mycoplasma testudinis] | 89/180 (49%) | 457 | 2.3e-54
|
| ref|WP_027122165.1| peptide deformylase [Mycoplasma imitans] | 90/183 (49%) | 451 | 1.5e-53
|
| ref|WP_011113901.1| peptide deformylase [Mycoplasma gallisepticum] | 90/186 (48%) | 451 | 1.5e-53
|
| ref|WP_014886246.1| peptide deformylase [Mycoplasma gallisepticum] | 90/186 (48%) | 451 | 1.9e-53
|
| ref|WP_027124188.1| peptide deformylase [Mycoplasma pirum] | 90/185 (48%) | 450 | 2.0e-53
|
| ref|WP_014574768.1| peptide deformylase [Mycoplasma gallisepticum] | 90/186 (48%) | 450 | 2.5e-53
|
Maintained by Jun Ishikawa