General features
| Gene ID | MPN556
|
| Type | CDS
|
| From | 677304
|
| To | 675691
|
| Strand | -
|
| General name | argS
|
| Definition | arginyl-tRNA synthetase
|
| nt length | 1614
|
| aa length | 537
|
| m.w. | 62120.14
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE6120 argS arginyl tRNA synthetase 781997:783691 | 257 | 2.8e-80
|
| mgen | WP_009885941.1 arginine--tRNA ligase [Mycoplasma genitalium] | 726 | 0.0e+00
|
| mpul | WP_010925047.1 arginine--tRNA ligase [Mycoplasma pulmonis] | 239 | 9.9e-74
|
| mmob | WP_011264644.1 arginine--tRNA ligase [Mycoplasma mobile] | 242 | 5.6e-75
|
| mmyc | NP_975580.1 arginyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 236 | 1.8e-72
|
| mgal | WP_011113241.1 arginine--tRNA ligase [Mycoplasma gallisepticum] | 323 | 4.8e-106
|
| uure | WP_004025854.1 arginine--tRNA ligase [Ureaplasma urealyticum] | 279 | 5.7e-89
|
| phyt | WP_011160806.1 arginine--tRNA ligase [Onion yellows phytoplasma] | 35 | 1.2e-03
|
| bsub | NP_391614.1 arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] | 305 | 3.1e-98
|
| cace | WP_010964359.1 MULTISPECIES: arginine--tRNA ligase [Clostridium] | 50 | 1.5e-07
|
| ecoli | NP_416390.1 arginine--tRNA ligase [Escherichia coli str. K-12 substr. MG1655] | 67 | 1.4e-12
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| DALR_1 | 1 | DALR anticodon binding domain | 420-537 | 102.4 | 1.7e-29
|
| tRNA-synt_1d | 1 | tRNA synthetases class I (R) | 101-394 | 48.8 | 4.8e-13
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874913.1| arginine--tRNA ligase [Mycoplasma pneumoniae] | 537/537 (100%) | 2881 | 0.0e+00
|
| ref|WP_159204492.1| arginine--tRNA ligase [Mycoplasma pneumoniae] | 536/537 (99%) | 2876 | 0.0e+00
|
| ref|WP_159204500.1| arginine--tRNA ligase [Mycoplasma pneumoniae] | 536/537 (99%) | 2876 | 0.0e+00
|
| ref|WP_054173278.1| arginine--tRNA ligase [Mycoplasma pneumoniae] | 536/537 (99%) | 2874 | 0.0e+00
|
| ref|WP_014575023.1| arginine--tRNA ligase [Mycoplasma pneumoniae] | 535/537 (99%) | 2871 | 0.0e+00
|
| ref|WP_014325599.1| arginine--tRNA ligase [Mycoplasma pneumoniae] | 534/537 (99%) | 2866 | 0.0e+00
|
| ref|WP_009885941.1| arginine--tRNA ligase [Mycoplasma genitalium] | 340/537 (63%) | 1874 | 0.0e+00
|
| ref|WP_038242149.1| arginine--tRNA ligase [Virgibacillus massiliensis] | 199/508 (39%) | 858 | 5.9e-105
|
| ref|WP_160806830.1| arginine--tRNA ligase [Virgibacillus massiliensis] | 199/508 (39%) | 858 | 6.4e-105
|
| ref|WP_021289859.1| arginine--tRNA ligase [Virgibacillus sp. CM-4] | 198/508 (38%) | 854 | 2.2e-104
|
Maintained by Jun Ishikawa