General features
| Gene ID | MPN545
|
| Type | CDS
|
| From | 665609
|
| To | 664761
|
| Strand | -
|
| General name | rnc
|
| Definition | ribonuclease III
|
| nt length | 849
|
| aa length | 282
|
| m.w. | 32652.35
|
| COG | [K] Transcription
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE3650 rnc ribonuclease III 477203:477937 | 60 | 2.8e-12
|
| mgen | WP_009885823.1 ribonuclease III [Mycoplasma genitalium] | 387 | 4.9e-139
|
| mpul | WP_010924967.1 ribonuclease III [Mycoplasma pulmonis] | 51 | 1.8e-09
|
| mmob | WP_011264931.1 ribonuclease III [Mycoplasma mobile] | 55 | 1.0e-10
|
| mmyc | NP_975465.1 ribonuclease III [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 94 | 1.4e-24
|
| mgal | WP_011113742.1 ribonuclease III [Mycoplasma gallisepticum] | 83 | 1.1e-19
|
| uure | WP_004025836.1 MULTISPECIES: ribonuclease III [Ureaplasma] | 92 | 7.4e-24
|
| phyt | WP_011160957.1 ribonuclease 3 [Onion yellows phytoplasma] | 83 | 5.1e-21
|
| bsub | NP_389475.1 ribonuclease III [Bacillus subtilis subsp. subtilis str. 168] | 97 | 4.4e-25
|
| cace | WP_010965055.1 ribonuclease III [Clostridium acetobutylicum] | 91 | 5.3e-23
|
| ecoli | NP_417062.1 RNase III [Escherichia coli str. K-12 substr. MG1655] | 68 | 8.6e-15
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribonucleas_3_3 | 1 | Ribonuclease-III-like | 34-156 | 89.3 | 2.1e-25
|
| Ribonuclease_3 | 1 | Ribonuclease III domain | 56-140 | 58.3 | 9.6e-16
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874902.1| ribonuclease III [Mycoplasma pneumoniae] | 282/282 (100%) | 1474 | 0.0e+00
|
| ref|WP_009885823.1| ribonuclease III [Mycoplasma genitalium] | 184/261 (70%) | 995 | 1.6e-133
|
| ref|WP_014894489.1| ribonuclease III [Mycoplasma genitalium] | 184/261 (70%) | 994 | 2.4e-133
|
| ref|WP_041612621.1| ribonuclease III [Spiroplasma apis] | 61/136 (44%) | 284 | 8.5e-27
|
| ref|WP_019003703.1| ribonuclease III [Cohnella laeviribosi] | 60/141 (42%) | 283 | 1.8e-26
|
| ref|WP_080840146.1| ribonuclease III [Cohnella sp. 6021052837] | 59/141 (41%) | 280 | 4.5e-26
|
| ref|WP_131456225.1| MULTISPECIES: ribonuclease III [unclassified Exiguobacterium] | 71/213 (33%) | 281 | 5.0e-26
|
| ref|WP_088077923.1| ribonuclease III [Bacillus alkalitelluris] | 61/156 (39%) | 277 | 1.2e-25
|
| ref|WP_131440293.1| MULTISPECIES: ribonuclease III [Exiguobacterium] | 70/213 (32%) | 277 | 1.6e-25
|
| ref|WP_110937655.1| ribonuclease III [Salipaludibacillus neizhouensis] | 66/172 (38%) | 272 | 6.7e-25
|
Maintained by Jun Ishikawa