General features
| Gene ID | MPN540
|
| Type | CDS
|
| From | 660680
|
| To | 660853
|
| Strand | +
|
| General name | rpmF
|
| Definition | ribosomal protein L32
|
| nt length | 174
|
| aa length | 57
|
| m.w. | 6622.76
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE9200 rpmF ribosomal protein L32 1233129:1232950 | 48 | 3.4e-11
|
| mgen | WP_009885820.1 50S ribosomal protein L32 [Mycoplasma genitalium] | 103 | 2.0e-33
|
| mpul | WP_010925128.1 50S ribosomal protein L32 [Mycoplasma pulmonis] | 43 | 1.7e-09
|
| mmob | WP_011264876.1 50S ribosomal protein L32 [Mycoplasma mobile] | 40 | 3.9e-08
|
| mmyc | NP_975574.1 50S ribosomal protein L32 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 47 | 6.0e-11
|
| mgal | WP_011113378.1 50S ribosomal protein L32 [Mycoplasma gallisepticum] | 83 | 2.1e-25
|
| uure | WP_004026178.1 50S ribosomal protein L32 [Ureaplasma urealyticum] | 50 | 4.3e-12
|
| phyt | WP_011160573.1 MULTISPECIES: 50S ribosomal protein L32 [Candidatus Phytoplasma asteris] | 35 | 2.0e-06
|
| bsub | NP_389391.1 ribosomal protein L32 [Bacillus subtilis subsp. subtilis str. 168] | 47 | 1.6e-10
|
| cace | WP_010965052.1 MULTISPECIES: 50S ribosomal protein L32 [Clostridium] | 34 | 3.5e-05
|
| ecoli | NP_415607.1 50S ribosomal subunit protein L32 [Escherichia coli str. K-12 substr. MG1655] | 45 | 8.2e-10
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L32p | 1 | Ribosomal L32p protein family | 2-53 | 66.2 | 2.2e-18
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874897.1| 50S ribosomal protein L32 [Mycoplasma pneumoniae] | 57/57 (100%) | 287 | 1.5e-32
|
| ref|WP_014325592.1| 50S ribosomal protein L32 [Mycoplasma pneumoniae] | 56/57 (98%) | 278 | 2.9e-31
|
| ref|WP_009885820.1| 50S ribosomal protein L32 [Mycoplasma genitalium] | 51/57 (89%) | 256 | 6.8e-28
|
| ref|WP_033160103.1| 50S ribosomal protein L32 [Mycoplasma alvi] | 43/56 (76%) | 220 | 2.8e-22
|
| ref|WP_027123912.1| 50S ribosomal protein L32 [Mycoplasma pirum] | 42/57 (73%) | 214 | 2.1e-21
|
| ref|WP_011113378.1| 50S ribosomal protein L32 [Mycoplasma gallisepticum] | 40/56 (71%) | 205 | 4.6e-20
|
| ref|WP_027122361.1| 50S ribosomal protein L32 [Mycoplasma imitans] | 40/56 (71%) | 205 | 4.8e-20
|
| ref|WP_027119683.1| 50S ribosomal protein L32 [Mycoplasma testudinis] | 37/57 (64%) | 193 | 3.8e-18
|
| ref|WP_050740452.1| 50S ribosomal protein L32 [Acetobacterium bakii] | 32/53 (60%) | 157 | 1.1e-12
|
| ref|WP_083798122.1| 50S ribosomal protein L32 [Pseudoramibacter alactolyticus] | 33/53 (62%) | 156 | 1.5e-12
|
Maintained by Jun Ishikawa