General features
| Gene ID | MPN537
|
| Type | CDS
|
| From | 659664
|
| To | 658426
|
| Strand | -
|
| General name | mucB
|
| Definition | UV protection protein MucB
|
| nt length | 1239
|
| aa length | 412
|
| m.w. | 47050.93
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE1490 mucB DNA-damage repair protein MucB 177800:176640 | 117 | 6.3e-31
|
| mgen | WP_010869448.1 DNA polymerase IV [Mycoplasma genitalium] | 533 | 0.0e+00
|
| mpul | WP_041363962.1 DNA polymerase IV [Mycoplasma pulmonis] | 107 | 3.2e-27
|
| mmob | WP_011264795.1 DNA polymerase IV [Mycoplasma mobile] | 95 | 3.9e-23
|
| mmyc | NP_975533.1 DNA polymerase IV [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 139 | 1.2e-38
|
| mgal | WP_011113830.1 DNA polymerase IV [Mycoplasma gallisepticum] | 186 | 1.9e-56
|
| uure | WP_004027185.1 DNA polymerase IV [Ureaplasma urealyticum] | 154 | 1.1e-44
|
| bsub | NP_390268.2 DNA-damage lesion bypass DNA polymerase [Bacillus subtilis subsp. subtilis str. 168] | 151 | 1.6e-42
|
| cace | WP_010963608.1 MULTISPECIES: DNA polymerase IV [Clostridium] | 128 | 2.2e-34
|
| ecoli | NP_414766.1 DNA polymerase IV [Escherichia coli str. K-12 substr. MG1655] | 129 | 6.9e-35
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| IMS | 1 | impB/mucB/samB family | 24-168 | 144.8 | 1.9e-42
|
| IMS_C | 1 | impB/mucB/samB family C-terminal domain | 252-362 | 50.0 | 4.2e-13
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874894.1| DNA polymerase IV [Mycoplasma pneumoniae] | 412/412 (100%) | 2197 | 0.0e+00
|
| ref|WP_014325590.1| DNA polymerase IV [Mycoplasma pneumoniae] | 411/412 (99%) | 2188 | 0.0e+00
|
| ref|WP_053344107.1| DNA polymerase IV [Mycoplasma pneumoniae] | 410/412 (99%) | 2181 | 0.0e+00
|
| ref|WP_054174965.1| DNA polymerase IV [Mycoplasma pneumoniae] | 410/412 (99%) | 2179 | 0.0e+00
|
| ref|WP_159203652.1| DNA polymerase IV, partial [Mycoplasma pneumoniae] | 359/360 (99%) | 1906 | 0.0e+00
|
| ref|WP_159203435.1| DNA polymerase IV, partial [Mycoplasma pneumoniae] | 303/304 (99%) | 1603 | 0.0e+00
|
| ref|WP_010869448.1| DNA polymerase IV [Mycoplasma genitalium] | 254/411 (61%) | 1372 | 0.0e+00
|
| ref|WP_027119955.1| DNA polymerase IV [Mycoplasma testudinis] | 130/385 (33%) | 524 | 9.7e-59
|
| ref|WP_038470767.1| DNA polymerase IV [Candidatus Izimaplasma sp. HR1] | 125/390 (32%) | 487 | 2.2e-53
|
| ref|WP_022355859.1| DNA polymerase IV [Faecalitalea cylindroides] | 119/340 (35%) | 476 | 6.9e-52
|
Maintained by Jun Ishikawa