General features
| Gene ID | MPN535
|
| Type | CDS
|
| From | 656922
|
| To | 657542
|
| Strand | +
|
| General name | ruvA
|
| Definition | Holliday junction DNA helicase RuvA
|
| nt length | 621
|
| aa length | 206
|
| m.w. | 23659.95
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE2790 ruvA holliday junction DNA helicase RuvA 367005:366346 | 81 | 1.5e-20
|
| mgen | WP_010869447.1 Holliday junction branch migration protein RuvA [Mycoplasma genitalium] | 295 | 9.0e-105
|
| mpul | WP_010925458.1 Holliday junction branch migration protein RuvA [Mycoplasma pulmonis] | 63 | 3.3e-14
|
| mmob | WP_011264790.1 Holliday junction branch migration protein RuvA [Mycoplasma mobile] | 60 | 3.2e-13
|
| mmyc | NP_975526.1 Holliday junction ATP-dependent DNA helicase RuvA [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 40 | 7.1e-06
|
| mgal | WP_011113863.1 Holliday junction branch migration protein RuvA [Mycoplasma gallisepticum] | 108 | 6.5e-31
|
| uure | WP_004025753.1 Holliday junction DNA helicase RuvA [Ureaplasma urealyticum] | 60 | 4.4e-13
|
| bsub | NP_390652.1 Holliday junction DNA helicase [Bacillus subtilis subsp. subtilis str. 168] | 45 | 4.0e-07
|
| cace | WP_010965583.1 MULTISPECIES: Holliday junction branch migration protein RuvA [Clostridium] | 51 | 2.1e-09
|
| ecoli | NP_416375.1 Holliday junction branch migration complex subunit RuvA [Escherichia coli str. K-12 substr. MG1655] | 55 | 1.1e-10
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| RuvA_C | 1 | RuvA, C-terminal domain | 151-195 | 43.7 | 2.7e-11
|
| RuvA_N | 1 | RuvA N terminal domain | 1-52 | 33.0 | 4.7e-08
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874892.1| Holliday junction branch migration protein RuvA [Mycoplasma pneumoniae... | 206/206 (100%) | 1086 | 1.2e-149
|
| ref|WP_159204630.1| Holliday junction branch migration protein RuvA [Mycoplasma pneumoniae... | 205/206 (99%) | 1080 | 8.2e-149
|
| ref|WP_010869447.1| Holliday junction branch migration protein RuvA [Mycoplasma genitalium... | 141/206 (68%) | 755 | 3.0e-99
|
| ref|WP_014894485.1| Holliday junction branch migration protein RuvA [Mycoplasma genitalium... | 140/206 (67%) | 747 | 4.7e-98
|
| ref|WP_027124079.1| hypothetical protein [Mycoplasma pirum] | 75/200 (37%) | 330 | 8.3e-35
|
| ref|WP_081794299.1| hypothetical protein [Mycoplasma pirum] | 75/200 (37%) | 330 | 1.3e-34
|
| ref|WP_084266136.1| hypothetical protein [Mycoplasma testudinis] | 82/200 (41%) | 297 | 2.1e-29
|
| ref|WP_052663908.1| hypothetical protein [Mycoplasma alvi] | 73/200 (36%) | 294 | 2.5e-29
|
| ref|WP_027121789.1| Holliday junction branch migration protein RuvA [Mycoplasma imitans] | 72/202 (35%) | 282 | 1.9e-27
|
| ref|WP_011113863.1| Holliday junction branch migration protein RuvA [Mycoplasma gallisepti... | 73/202 (36%) | 270 | 1.4e-25
|
Maintained by Jun Ishikawa