General features

Gene IDMPN528a
TypeCDS
From650402
To650920
Strand+
General name
DefinitionPenicillin-binding protein-related factor A, putative recombinase
nt length519
aa length172
m.w.19724.76
COG[R] General function prediction only

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE2460 recombination protein U 303446:303979901.1e-24
mgenWP_009885810.1 recombination protein U [Mycoplasma genitalium]2383.0e-83
mpulWP_010924890.1 Holliday junction resolvase RecU [Mycoplasma pulmonis]852.0e-23
mmobWP_041362956.1 Holliday junction resolvase RecU [Mycoplasma mobile]722.2e-18
mmycNP_975402.1 recombination protein U [Mycoplasma mycoides subsp. mycoides SC str. PG1]562.2e-12
mgalWP_011113372.1 Holliday junction resolvase RecU [Mycoplasma gallisepticum]1136.0e-34
bsubNP_390112.1 Holliday junction resolvase [Bacillus subtilis subsp. subtilis str. 168]782.2e-19

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; bsub, Bacillus subtilis;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

RecU1Recombination protein U6-165113.59.1e-33

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874885.1| recombination protein U [Mycoplasma pneumoniae] 171/172 (99%)8906.6e-121
ref|WP_009885810.1| recombination protein U [Mycoplasma genitalium]114/168 (67%)6061.0e-77
ref|WP_027119679.1| Holliday junction resolvase RecU [Mycoplasma testudinis]74/170 (43%)3431.2e-37
ref|WP_052664032.1| Holliday junction resolvase RecU [Mycoplasma alvi]66/165 (40%)3046.5e-32
ref|WP_004024866.1| Holliday junction resolvase RecU [Mycoplasma iowae]66/162 (40%)2969.5e-31
ref|WP_050796836.1| Holliday junction resolvase RecU [Mycoplasma iowae]66/162 (40%)2971.0e-30
ref|WP_052663058.1| Holliday junction resolvase RecU [Mycoplasma pirum]66/168 (39%)2951.4e-30
ref|WP_011113372.1| Holliday junction resolvase RecU [Mycoplasma gallisepticum]64/165 (38%)2831.3e-28
ref|WP_151059580.1| Holliday junction resolvase RecU [Mycoplasma gallisepticum]64/165 (38%)2831.5e-28
ref|WP_027122366.1| Holliday junction resolvase RecU [Mycoplasma imitans]63/165 (38%)2794.7e-28

Maintained by Jun Ishikawa