General features
| Gene ID | MYPE4850
|
| Type | CDS
|
| From | 622513
|
| To | 622836
|
| Strand | +
|
| General name |
|
| Definition | conserved hypothetical protein
|
| nt length | 324
|
| aa length | 107
|
| m.w. | 12803.47
|
| COG | [S] Function unknown
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN424 ylxM conserved hypothetical protein 510561:510253 | 52 | 7.1e-12
|
| mpul | WP_041364208.1 hypothetical protein [Mycoplasma pulmonis] | 41 | 7.0e-08
|
| mmob | WP_011264573.1 hypothetical protein [Mycoplasma mobile] | 35 | 2.1e-05
|
| mmyc | NP_975476.1 DNA-binding protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 49 | 1.3e-10
|
| mgal | WP_011113404.1 hypothetical protein [Mycoplasma gallisepticum] | 46 | 2.3e-09
|
| uure | WP_004025510.1 putative DNA-binding protein [Ureaplasma urealyticum] | 50 | 4.1e-11
|
| phyt | WP_041624838.1 hypothetical protein [Onion yellows phytoplasma] | 28 | 4.3e-03
|
| bsub | NP_389479.1 component of the signal recognition particle (SRP) protein-targeting pathway [Bacillus subtilis subsp. subtilis str. 168] | 69 | 6.9e-18
|
| cace | WP_010965060.1 MULTISPECIES: putative DNA-binding protein [Clostridium] | 69 | 9.2e-18
|
*mpne, Mycoplasma pneumoniae; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| UPF0122 | 1 | Putative helix-turn-helix protein, YlxM / p13 like | 8-101 | 94.3 | 4.3e-27
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077309.1| hypothetical protein [Mycoplasma penetrans] | 107/107 (100%) | 530 | 3.9e-68
|
| ref|WP_004025428.1| hypothetical protein [Mycoplasma iowae] | 57/105 (54%) | 283 | 1.8e-30
|
| ref|WP_127068199.1| MULTISPECIES: YlxM family DNA-binding protein [unclassified Veillonell... | 39/80 (48%) | 203 | 2.2e-18
|
| ref|WP_127448241.1| YlxM family DNA-binding protein [Veillonella sp. 3310] | 38/80 (47%) | 202 | 3.5e-18
|
| ref|WP_013120901.1| MULTISPECIES: putative DNA-binding protein [Thermincola] | 42/81 (51%) | 200 | 9.6e-18
|
| ref|WP_101697707.1| YlxM family DNA-binding protein [Clostridium minihomine] | 39/80 (48%) | 199 | 1.3e-17
|
| ref|WP_127161196.1| putative DNA-binding protein [Veillonella sp. VA137] | 38/80 (47%) | 198 | 1.4e-17
|
| ref|WP_005377912.1| MULTISPECIES: putative DNA-binding protein [Veillonella] | 39/95 (41%) | 198 | 1.4e-17
|
| ref|WP_008826453.1| YlxM family DNA-binding protein [Haloplasma contractile] | 39/81 (48%) | 198 | 1.5e-17
|
| ref|WP_105092414.1| putative DNA-binding protein [Veillonella tobetsuensis] | 39/95 (41%) | 198 | 1.6e-17
|
Maintained by Jun Ishikawa